Pedobacter gandavensis: QG516_22040
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Entry
QG516_22040 CDS
T09013
Name
(GenBank) lantibiotic dehydratase
KO
K20483
class I lanthipeptide synthase [EC:
3.13.2.4
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj02020
Two-component system
pgj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QG516_22040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QG516_22040
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.4 lanthipeptide synthase
QG516_22040
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lant_dehydr_N
Lant_dehydr_C
Motif
Other DBs
NCBI-ProteinID:
WGQ09198
LinkDB
All DBs
Position
5232477..5235623
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AA seq
1048 aa
AA seq
DB search
MHTNLDKAVIRVPLLGINNLQDLRLTDLSGIHIIERLKLLCNPVIIEALYISSPAFTKTL
KYIIDKNEKGLEYSKLLEVWLTFVKYYTRMCSRGTPYGLMASVGTISLNKETESAGGFEG
GIHVQLDNGIVADLSYNLQQSDDLLSNLIYYPNPSIYLHANKLKYIEVVKREGDKKFAVS
KVEHNPVIEKVLNYSVEGKCKHDIVDYIKNEFADIYDPEDIETLISSLISNQILLNNYSS
SSTKKTLFSYIADHLGRSGATEDKPGMVSFIDQEINKIRKQDWNNNERTLRAIEDHLERL
GCQVNGASVFHVNFIRSFSDSSIGANVIDKIRSAVELTASINENYRSRNFETFKSVFAQR
YENRFVPLTEVLDEEIGLGFPVGNILDPQVDGSYDGIYIPNPGSSPFEDHQFNDFSIFLF
NKIAALSAVNGKVLELTIKEMKEFAVHDIKLPPTYSVFCSLLGKSTEAINQGNFEVVLSN
TAYNTASGPINRFSVSDVEIETLCREIFEHEKELMKDKIVAEVLHTPNSRIENINFRTVT
RDFEIPIESLSSHGPDQQIKMDEILVNVVNNNVKLICRKSKKEIIPKISNNHHFNNSHAH
PAYRFFGEVQLQEQQNNLLWHWGPLVKLNFLPRVVLDQQIICSLATWRVQLDKSFFDQTD
QPTDKLRDKLFALGLPKWISVRQNSDNLLVLDIEDPACLLILMKQFKKYPYLILHEYLST
PENSFLKDSEGNSFINELVIPYLAKKKEPERSGTGSIGYKAPKIKDKRSFFPGGEFLYLK
IYCSRKIGQQLLLGSIYPMLFGSKSDGDPTFFVRYEDPEFHIRLRVRKEGNELLMPKIHQ
RLDSYLKNKFIYKIQYDTYHRELDRYAQIPYDKTEMIFAFDSKAILELLKHLNKKGLDSI
TWIVAIKNIHAYLMGFGMELEEMLIFCKAIRTGFFVEFGLENKDFLKSMNVKLKNEYTLI
NSIITENDPAYQALYTIFSARQASFAALLKPTESKKISSHYGQLSSYIHMSTNRLFSSDQ
RLKEAMSYDLLYNYLLAQKKGYHKSLIK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaaatttagataaagctgtaatcagagtcccattacttggaataaataacctg
caagatctgagattaacagatctttcgggtattcacatcattgaacgcctgaaactgctg
tgtaatcctgtaatcatagaagctttatatatttcgtctccagcgttcacaaaaacattg
aaatatattattgataaaaatgaaaaaggcctggaatattcaaagttactggaggtttgg
ttaacatttgtgaagtactataccagaatgtgttcaagagggacaccttatggcttgatg
gcaagtgtaggtactatttctttaaataaggaaactgaaagtgcaggtggttttgaagga
gggattcacgttcaattggacaatggtattgtagcagatctttcttataacctgcagcaa
tctgatgatttgctgagcaatctgatttattatccgaatccaagtatctacttgcatgct
aataaattaaaatatatagaggttgtaaaaagggaaggggataagaagtttgctgtatct
aaagtggagcataatccggtaatagaaaaagtgctgaattattctgttgaaggaaagtgt
aagcatgacatcgtcgattatataaaaaatgagtttgcggatatttatgatccagaggat
attgagacattaatttccagcttaatttcgaaccagattcttttaaataactatagttca
tcttccacaaaaaaaacacttttttcctatatagcggatcatcttggtagatcaggagct
actgaggataaaccaggtatggtctcttttatagatcaggaaattaataaaattcgtaaa
caggattggaacaataacgaacgtacattacgtgccattgaagatcatctggaacgtttg
ggttgccaagttaacggtgcttcagtttttcatgttaatttcatacgctctttctccgat
agctccattggtgcgaatgtcattgataaaattcgatcggctgttgagctgactgcctcc
attaatgaaaattataggtccaggaattttgaaactttcaaatctgtttttgctcaacgg
tacgagaacagatttgttccccttaccgaagtcctggatgaagagattggcctcggtttt
cctgtaggcaatatcttagatcctcaagtggatggaagctacgacggaatttatatacca
aatccaggctccagtccattcgaagaccatcaatttaatgacttttctatctttttgttc
aataaaatagcagcattaagtgctgttaatggaaaagtactggaattaactattaaggaa
atgaaggagtttgcagtgcatgatatcaagctcccacctacttattcggttttctgcagt
ttgttagggaaaagtacggaggccattaatcagggtaattttgaagtcgtgctttctaat
acggcgtacaatactgcaagtggtcccatcaatcgtttttctgtctctgatgtagagatt
gaaacgctttgcagagagatttttgagcatgaaaaggagctgatgaaggataagattgtt
gctgaagtattgcatactcccaattctagaatcgaaaatattaacttcagaacggtgaca
agggattttgagataccaattgaatcgttgtccagccacgggccggatcagcagattaag
atggatgaaattttagtaaatgttgtaaataacaatgtcaagctgatctgcagaaaaagt
aaaaaagagattattcctaaaatttccaataaccatcattttaataactcccatgcacat
cctgcttatcgcttttttggggaagtacagcttcaagaacagcaaaataatttgctttgg
cattggggacctcttgtaaaattgaattttttgccaagggtagtgttggatcagcaaatc
atttgtagtctggctacctggagagttcagttggataagtcgttctttgatcaaaccgac
cagccgacagataagctcagggacaagctttttgcattaggactcccaaaatggatttca
gttcggcaaaatagtgacaatctattggtgcttgatatagaggatcctgcctgtttattg
atattgatgaagcaatttaagaaatatccctatttaatacttcatgagtacctatctaca
ccggaaaattcctttttaaaagattcagaaggtaattcttttattaatgaactggtgatt
ccatatttagcaaaaaagaaagaaccagaacgctccggcacagggagtattggttataaa
gcgccaaagattaaggataaaagatcattttttcctggcggcgagtttttatacctgaag
atttattgtagtagaaaaattgggcagcagctgttgctgggatcgatttatcccatgtta
ttcggatcaaaaagtgatggtgatcctacattttttgtacgctatgaagatcctgaattt
catattagactaagggtacgtaaggaagggaatgagttgctgatgccgaagattcaccag
cgtctggatagctaccttaaaaataaatttatatataaaatacagtacgatacttaccat
cgggaactggatcgctacgcccagattccctacgataaaacggaaatgatattcgctttc
gatagtaaggctattttagaattgttgaagcatttgaataaaaaaggtttagactccatc
acctggatcgtcgccataaaaaacatacatgcctatttaatgggttttggaatggagctg
gaggaaatgctgattttttgcaaggccatcaggacgggtttctttgtggaatttggattg
gagaataaggattttctgaagtcgatgaatgtaaaattgaagaatgagtataccttgatc
aatagtataatcactgaaaatgatcctgcttatcaggccttgtatactattttttccgcc
agacaggccagctttgctgctttgctcaagcctactgaaagtaaaaaaatcagcagtcac
tatggccagctgtctagttacatccatatgtctaccaataggcttttttcatcggatcag
cggttaaaagaagcgatgtcttacgacttactctacaattatctcctcgcccaaaaaaag
ggttatcacaaatcattaattaaatag
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