Pedobacter gandavensis: QG516_23925
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Entry
QG516_23925 CDS
T09013
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pgj
Pedobacter gandavensis
Pathway
pgj01501
beta-Lactam resistance
pgj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_23925
01503 Cationic antimicrobial peptide (CAMP) resistance
QG516_23925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_23925
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_23925
Transporters [BR:
pgj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QG516_23925
Antimicrobial resistance genes [BR:
pgj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QG516_23925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WGQ09565
LinkDB
All DBs
Position
5659554..5662832
Genome browser
AA seq
1092 aa
AA seq
DB search
MNLIRFALRKPISILVLVAGLFFFGIGAIKDIKVDILPKMNLPVIYIAHPFGGYTPSQME
AYFGKQYINILLFANGIKTIETKNVQGLMLMKLTYYEGTNMAQAAAELSSLSNRAQAIFP
PGSQPPFIIRFDASSLPVGQLVLSSPIRSNNELQDFANTYVRASFTAIPGLLAPAPFGGS
VRTIEINVDPELLRAHQLTVDQVVEAIKINNQTAPSGNVRIGDKNYLTPTNYTIKKVKEF
ENIPLFKGGVQNLYLRDVAVVKDGADATVGYALINGKRSVYLSIAKSGDASTWDVVSKLK
ENLPMIQNTLPEDVKLSYEFDQSVYVINAVKSLISEGVIGALLTGLMVLLFLGDKRAALI
VILTIPTSIIAGVLFLKLFGQTINIMSLSGLALAIGILVDESTVTIENIHQHFDMGKPKA
LAIWDACKEIAFPKLLILFCILAVFAPAFTMTGIPGALFLPLALAIGFSMVVSFFLSQTF
VPIMANWLMVAHPKKAKPHSAAITDDEAVFLETGLSLESEKDTLNQKRVLVEREDFNNDG
KLGPFERFRNRFMRFLDRIMPYRKPVVLGYLLVIISIAAILLANIGRDVLPKVNSSQFQL
RMRAPDGTRLERTEEKVQVILAELKKMVGPEHLNITSVYVGQHPALFSVNPIYLFMAGPH
EAVFQVGLKDYHVDMEAFKDLLRARIKALEPDVKLSFEPIELTDKVLSQGSSTPVEVRIA
GKNKKENEVYANKIMKELNGISYLRDVQIAQPIKYPSLNINIDRIKAAQVGVDLNDVSRS
LVASTSSSRYTDKNVWVDERIGLAYGVQVQVPFNKMSSKDNLGEIPLLKNSNRPILSDVA
SISTDTTYGENDNVGATPYLSVTANLNKKDLGTASKDVTKAIKSLGELPRGLIVQPVGMI
KVLDDTLSSLQSGLLVAIVVIFLMLSANFQSFKVPLVILATVPAVVLGALLLLMLTGSTL
NLQSYMGIIMSVGVSIANAVLLITNAEQLRKHNGNALQSAREAAALRIRPIIMTTVAMIA
GMLPMAIGHGEGGDQVSPLGRAVIGGLIASTFAVLVILPLVFAWVQGKVSTESISLDPED
EESKHYIKGLSE
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatacgttttgcacttcgtaaacccatctccatcctggtgcttgttgccggt
ttgttcttctttgggatcggcgccatcaaagatatcaaggtagatattttacctaaaatg
aaccttcctgtgatctatattgcgcatccttttggggggtatacgccttctcaaatggaa
gcctattttggaaaacaatacatcaatatcctgctttttgccaatgggattaaaaccata
gaaacgaagaatgtacagggattgatgctcatgaaactgacttattatgaaggaacaaat
atggcgcaggccgctgccgagctcagttcgctttccaatagggcacaagcaatttttccg
ccaggctcacaacctccattcatcattcgtttcgatgcttcctccttgcccgtcggacag
ctggtattgagcagtccgatccgcagtaacaatgaactgcaggattttgcaaatacctat
gtgagagcttcatttacggccattccaggtttactggctcctgcaccttttggcgggagt
gtgcgaaccattgagatcaacgtagatccagaattgctgcgcgcacatcagctcaccgta
gatcaggtggtggaggctattaaaataaataaccagaccgcaccttcggggaacgttcgg
attggtgataaaaactacctgacaccaaccaattacacgataaaaaaagtaaaagaattt
gagaatattcctctgtttaaaggaggggtacagaacctgtacctccgtgatgtagcggta
gtgaaggatggggcggatgcgacagtgggttatgcactgatcaatggaaaacgatctgtg
tacctgagtattgccaagtctggggatgcttctacctgggatgtggtgagtaaactgaaa
gagaacctccccatgatccagaatacattaccggaagatgtgaagctttcttatgagttt
gaccaatccgtgtatgtgatcaatgcggtaaaaagtttgatcagcgagggcgtaattggc
gctttgttaaccggtttaatggtgctgttattcctcggtgataaacgagccgcattgatt
gtgatcctgaccattcctacttccatcatagccggagtattgtttttaaaacttttcgga
caaacgatcaatatcatgtccttgagtggactggccctggccatcgggattttggtagat
gagtcgaccgtaacgatcgaaaatatacaccagcattttgatatgggaaaaccgaaggct
ttagcgatctgggatgcctgtaaagagattgctttcccgaaattgctgatcttgttctgt
atcctggccgtatttgctcctgcatttacaatgactggtatacctggagcattgttttta
ccgctggccctggccattggtttttctatggtggtttctttctttttatctcaaactttc
gtacccattatggccaactggctgatggtagcgcatccaaagaaagcaaaaccgcattca
gcagcgatcactgatgatgaagcggtgtttttagaaacagggttgagcctggaatcagaa
aaggacaccctaaatcagaagagggtattggtagaaagggaagactttaacaatgatggc
aaattggggccatttgagcgttttagaaaccgctttatgcgctttctggaccggattatg
ccttaccgaaaaccagtagtgctgggctatctgttagtcatcatttctatcgcagcgatt
ttactcgccaacatcggaagagatgtactgccgaaagtaaattccagtcagtttcaattg
agaatgcgggcgccggatggaacccgtctggagcgcacagaagaaaaagttcaggtcatc
ctggcggaattaaagaaaatggtggggccggaacacctgaatattacctcagtttatgtt
gggcagcatcctgctttgttttctgtaaatccaatatatttatttatggcaggacctcat
gaagctgtttttcaggtgggattgaaagattaccatgtggatatggaagcgtttaaagac
ctgctgagggcccgtattaaagcattggagcccgatgttaaattgtcgtttgagccgata
gaacttacggataaagtattgagtcagggttcttctactccagtggaagtgcgcatcgca
gggaaaaataagaaagaaaacgaagtatacgcgaataagatcatgaaggaattgaatgga
attagttatctgagagacgtgcagattgcacagccgatcaaatatccttcccttaacatc
aacatcgaccggattaaagcagcacaggttggcgtagatttaaatgatgtatccaggtct
ttggtggcttccacttcttcgtcccgatatacggataaaaatgtctgggtagacgaaagg
attggtctcgcttacggtgttcaggttcaggttcccttcaataaaatgagcagtaaggat
aaccttggagaaattccgctgttgaagaattcaaaccgtccgatattgagtgatgtggcg
agcatcagtacagataccacctacggggaaaatgacaatgttggagctacgccatattta
tcggtaaccgccaacctgaataaaaaggaccttgggacagcctcaaaagatgtcacaaaa
gccatcaaatctttgggagaactgccaagagggctgattgtacagccagtagggatgatt
aaggtgctggatgataccttgagcagtctgcaatccgggctattggtagccattgtggtg
atctttttgatgttatcggcaaactttcaatctttcaaagttcctttggtgattttagcg
acggttccagcggtagtattgggtgcgttattgctgttgatgctaaccggctctaccttg
aacttgcagtcctatatgggaatcattatgtcggtaggagtgtctattgcgaatgcagta
ctcctcattaccaatgcggaacagctgcgtaaacacaatggcaatgctttacagtcggca
agagaggccgctgcattgcggatccgtcctattattatgaccactgtggccatgattgca
gggatgctgccaatggcgattggacatggagaaggcggtgatcaggtctccccattggga
agagctgtaattggaggtttaattgcttctacctttgccgtgctggtcattttaccgctg
gtattcgcctgggtgcagggaaaagtttccacggagtcgatttctctggatcctgaagat
gaagaaagtaaacactacatcaagggcttgtccgaataa
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