Phaeobacter inhibens 2.10: PGA2_c03210
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Entry
PGA2_c03210 CDS
T02193
Symbol
mdh
Name
(GenBank) malate dehydrogenase Mdh
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00020
Citrate cycle (TCA cycle)
pgl00270
Cysteine and methionine metabolism
pgl00620
Pyruvate metabolism
pgl00630
Glyoxylate and dicarboxylate metabolism
pgl00680
Methane metabolism
pgl00710
Carbon fixation by Calvin cycle
pgl00720
Other carbon fixation pathways
pgl01100
Metabolic pathways
pgl01110
Biosynthesis of secondary metabolites
pgl01120
Microbial metabolism in diverse environments
pgl01200
Carbon metabolism
Module
pgl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PGA2_c03210 (mdh)
00620 Pyruvate metabolism
PGA2_c03210 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
PGA2_c03210 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
PGA2_c03210 (mdh)
00720 Other carbon fixation pathways
PGA2_c03210 (mdh)
00680 Methane metabolism
PGA2_c03210 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PGA2_c03210 (mdh)
Enzymes [BR:
pgl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
PGA2_c03210 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
3HCDH_N
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
AFO86341
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All DBs
Position
complement(355262..356224)
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AA seq
320 aa
AA seq
DB search
MARPKIALIGAGQIGGTLAHLAALKELGDVVLFDIAEGTPEGKALDIAESGPSEGFDAKL
KGTQSYEDIAGADVCIVTAGVPRKPGMSRDDLLGINLKVMKSVGEGIRDHAPDAFVICIT
NPLDAMVWALREFSGLPHEKVCGMAGVLDSARFRHFLAEEFNVSMKDVTAFVLGGHGDTM
VPLTRYSTVAGIPLPDLVKMGWTSQEKLDAIVQRTRDGGAEIVGLLKTGSAFYAPATSAI
EMAEAYLKDQKRVLPCAAYVDGALGLKGMYVGVPTVIGAGGIERVIDIKMTSDEQTMFDN
SVNAVKGLVEACKGIDGSLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacccaaaatcgccctgattggcgcaggtcagatcggtggcacacttgcccac
ctcgcagcactgaaagaactcggcgacgtcgtcctgttcgacattgccgaaggcaccccc
gaaggcaaggcgctcgacatcgccgaatccggtccttccgaaggcttcgacgccaagctg
aagggcacccaatcctatgaggacatcgctggcgcagacgtctgcatcgtgacggctggt
gtgccgcgcaagcctggtatgagccgcgatgacctgctgggcatcaacctcaaggtcatg
aaatccgtaggtgaaggcatccgtgatcacgcgccagatgcgtttgtgatctgcatcacc
aaccctctggatgcgatggtctgggctctgcgcgaattctccggcctgccccacgagaaa
gtatgcggcatggccggcgtgctggacagcgcccgcttccgccacttcctggcagaagaa
ttcaacgtctccatgaaagacgtcaccgcatttgttctgggtggccacggtgacaccatg
gtgccgctgacacgctactcgaccgttgctggtatcccgctgcctgatctggtcaagatg
ggctggaccagccaggagaaactggatgcaattgtccagcgcacccgcgatggtggcgca
gagatcgtcggtctgctgaaaaccggctctgccttctacgcaccagcaacctccgccatc
gagatggccgaagcctacctcaaggatcagaaacgcgtcctgccctgcgcggcctatgtt
gacggcgctctcgggctcaaaggcatgtatgtcggcgtgccgacagtgatcggcgctggc
ggcatcgaacgtgttatcgacatcaagatgacctcggacgagcaaaccatgttcgacaac
tctgtcaacgcggtcaaaggtctggtcgaagcgtgcaaaggtatcgatggttcgctagcc
taa
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