Phaeobacter inhibens 2.10: PGA2_c28380
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Entry
PGA2_c28380 CDS
T02193
Name
(GenBank) putative citrate lyase subunit beta
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00630
Glyoxylate and dicarboxylate metabolism
pgl00660
C5-Branched dibasic acid metabolism
pgl00680
Methane metabolism
pgl00720
Other carbon fixation pathways
pgl01100
Metabolic pathways
pgl01120
Microbial metabolism in diverse environments
pgl01200
Carbon metabolism
Module
pgl_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PGA2_c28380
00660 C5-Branched dibasic acid metabolism
PGA2_c28380
09102 Energy metabolism
00720 Other carbon fixation pathways
PGA2_c28380
00680 Methane metabolism
PGA2_c28380
Enzymes [BR:
pgl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
PGA2_c28380
4.1.3.25 (S)-citramalyl-CoA lyase
PGA2_c28380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
AFO88812
LinkDB
All DBs
Position
3119067..3120029
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AA seq
320 aa
AA seq
DB search
MSFRIQPAAPARPNRCQLFGPGSNAKLFPKMAASAADVINLDLEDSVAPSDKDVARANVI
EALNTVDWGNKYISVRINGLDTPYWYRDVVDLLEQAGDRLDQIMIPKVGCAEDVYAVDAL
VTAIERAKGRSKRISFEVIIESAAGIAHVEAIAASSPRLQAMSLGAADFAASMGMQTTGI
GGTQEDYYMLRAGEKHWSDPWHWAQAAIVAACRTHGILPVDGPFGDFSDDEGYIAQAKRS
ATLGMVGKWAIHPKQIALANQVFTPSDEAVGEAREILAAMEQAKANGEGATVYKGRLVDI
ASIKQAEVIVAQSELIAQNG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcgcatccaacctgccgccccggcccgcccgaaccgctgtcaactgtttggc
cccggttccaacgccaagctgtttcccaaaatggcggcctccgcagcagatgtgatcaac
ctcgaccttgaggattcggtcgcgccctcggacaaggacgtggcccgcgccaatgtgatc
gaggccctgaacaccgtcgactggggcaacaaatacatctccgtgcggatcaacgggctg
gatacgccctattggtaccgcgatgtggtcgatctgctggagcaggcgggcgaccggttg
gaccagatcatgatccccaaagtgggctgcgccgaagatgtctatgccgttgacgccttg
gtcacggcgattgaacgcgccaagggccgatccaaacgcatatccttcgaggtgatcatc
gaatctgccgccggcatcgcccatgttgaagccattgccgcctccagcccgcgcctgcag
gcaatgagcctgggtgcggcggattttgccgcttcaatgggcatgcagaccaccggcatc
ggcggcacgcaggaggattattacatgctgcgcgcgggcgaaaaacactggtccgacccc
tggcactgggcgcaggccgccattgtcgctgcctgccgcacacatggcattctgccggtc
gatggtccgtttggggatttctccgacgacgaaggctacatcgcccaggccaaacgctcc
gcgacgctgggcatggtgggcaaatgggccatccaccccaaacagatcgcactggccaat
caggttttcaccccctcggatgaggccgtaggtgaggcgcgcgaaatcctcgccgctatg
gagcaagccaaggccaatggcgaaggggccactgtctacaagggacgtctggtcgatatc
gcctccatcaaacaggcggaggtcatcgttgcccaatcggagctgatcgcccagaacggc
taa
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