Paenibacillus graminis: PGRAT_17060
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Entry
PGRAT_17060 CDS
T03325
Name
(GenBank) PhoB family transcriptional regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
pgm
Paenibacillus graminis
Pathway
pgm01502
Vancomycin resistance
pgm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PGRAT_17060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PGRAT_17060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pgm02022
]
PGRAT_17060
01504 Antimicrobial resistance genes [BR:
pgm01504
]
PGRAT_17060
Two-component system [BR:
pgm02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
PGRAT_17060
Antimicrobial resistance genes [BR:
pgm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
PGRAT_17060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
VpsR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AIQ69144
UniProt:
A0A089NJ94
LinkDB
All DBs
Position
complement(3886510..3887208)
Genome browser
AA seq
232 aa
AA seq
DB search
MCARILIVDDDRTIVEFLSIYLEREGYSISTCYDGETALDHIRTGVFQLILLDIMMPVMN
GFDLIGRIREISEVPVIFLTAKDQQEDKIRGFIAGCDDYVTKPFDLTELSLRISAILKRR
PAAAEKSAEAPGELQIKDVTLLPEEHAVSKNGVEINMTPKEYGILLLLARNKGRVFTSRD
IYELVWEDTYLESDNTVLTHIRNLREKLGDTVKNSKYIRTVWGVGYKVDKEA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcccggattttaattgtggatgacgaccggacgattgtggaatttttatccata
tatttggagcgggaagggtacagcatttcgacctgctatgatggggagacggcgctggac
cacattcggaccggggtttttcagctcattttactggatataatgatgccggtcatgaat
ggttttgatctgattggccggattagggaaatctcggaggttccggtgattttcctgacc
gccaaggaccagcaggaggataaaatcaggggattcattgccggctgcgatgattatgtg
acgaagccctttgatctgacagagctgtctttgcgaatctcagcgattctaaaacgcagg
ccggcagccgcagaaaagtcggcggaagcaccgggagagctgcagattaaggatgtcact
ctgttgccggaggaacatgccgtgtccaaaaatggcgtagagatcaacatgacgcccaaa
gaatatgggatattgctgctgctggccaggaacaagggccgggtgtttacctcacgcgat
atttatgagctggtatgggaagatacctatctggagagcgacaacaccgtgcttacccat
atccgcaatctgcgggaaaagctgggtgataccgtcaaaaactccaagtacatcagaacg
gtctggggtgttggttataaagtggacaaagaagcttaa
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