Paenibacillus graminis: PGRAT_20580
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Entry
PGRAT_20580 CDS
T03325
Name
(GenBank) isopropylmalate isomerase
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00290
Valine, leucine and isoleucine biosynthesis
pgm00660
C5-Branched dibasic acid metabolism
pgm01100
Metabolic pathways
pgm01110
Biosynthesis of secondary metabolites
pgm01210
2-Oxocarboxylic acid metabolism
pgm01230
Biosynthesis of amino acids
Module
pgm_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
PGRAT_20580
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
PGRAT_20580
Enzymes [BR:
pgm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
PGRAT_20580
4.2.1.35 (R)-2-methylmalate dehydratase
PGRAT_20580
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Gene cluster
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Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AIQ69757
UniProt:
A0A089M922
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All DBs
Position
complement(4584907..4585509)
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AA seq
200 aa
AA seq
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MEAFKKLTGIVAPVDRVNVDTDAIIPKQFLKRIERTGFGQFLFYEWRFDEAGNDNAAFEM
NKPRYKGASVLISRANFGCGSSREHAPWAIMDYGFRVVIAPSYADIFYNNCFKNGILPIK
LSESQVDELFKRTAEHDGYELTVDLENNLLRDDYGLSITFELDEHRRQFLLQGLDDIGLT
LQHADEIAAYEERHAAKLFA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaagcattcaagaaattaaccggaattgttgccccggtagaccgggtaaatgtagat
acggacgctattatccctaagcaatttttgaaacggatcgaacgtacaggctttggacag
tttttgttctacgaatggcgttttgacgaagccggaaatgacaatgctgcgtttgaaatg
aacaaaccccgctataaaggggcttcggttctgatctcgcgggcgaatttcggctgtggc
tcctcacgtgagcatgcgccttgggccattatggattatggcttccgggtcgtcattgcc
ccttcgtatgccgatatcttctacaataactgcttcaaaaacgggattttgccgatcaag
ctgtcggaatcccaggtagatgagctgttcaagcgtacagcagagcatgacggctacgaa
ttgacggtggatctggagaataacctgctccgggatgattatggactcagcattacattt
gagctggatgaacaccgccgccaattcctcctgcagggactggatgatatcgggctgacg
cttcagcatgccgatgaaattgccgcctacgaggagcgccacgctgctaagctgtttgca
taa
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