Pseudobacter ginsenosidimutans: FSB84_08640
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Entry
FSB84_08640 CDS
T06126
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo01501
beta-Lactam resistance
pgo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FSB84_08640
01503 Cationic antimicrobial peptide (CAMP) resistance
FSB84_08640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgo02000
]
FSB84_08640
01504 Antimicrobial resistance genes [BR:
pgo01504
]
FSB84_08640
Transporters [BR:
pgo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FSB84_08640
Antimicrobial resistance genes [BR:
pgo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FSB84_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
PRIMA1
Motif
Other DBs
NCBI-ProteinID:
QEC41756
LinkDB
All DBs
Position
complement(2102184..2105327)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSAISQMSISRPVLAGVMSVLLILFGIVGYTFLGTREYPVTDSPIVTVTTVYPGASADII
ASQVTKPLEEAIAEANGIRALSSVSREQVSIITVEFNMNADLEAAANDVRDKVSKSRQQL
PTDIEPTIVEKAGPPDFLVFLTVQSDTKSLEDITDFVTINIKERLQSIPGVRLVDTYAGR
RRAMRLRMDPVKLSSYGLSPADIQNALQRENVDLPSGRIEGQQTEMTLRTLGRLVTEEDF
NNMIISEKNGAIVRFRDVGQAIMSSQNERTAMIVAEGQQARYGVGTGVQPQRGANSLAIV
DEFNKRFEDIIKSAPKDYNIRLGKDFTVPVKNSLDEVEETLILAFGLVTIIIFIFLRDWR
STLIPLVAIPVSIISAFFIMYLADYSINVLTLLGLVLAIGLVVDDAIVVLENIYSKVEQG
MGPVEAARKGSNEIYFAVISTTVTLAAVFLPIMFLGGITGKLFKEFVVVVAGSVLISAFV
ALTLSPMMSAYLLKAGAHHNWLYRKTEPFFVKLNNGYENLLRGFMRFRWLGFALLLFSFG
IAYLLAPKLPSELAPLEDRSLVGLAVIAPEGTSFESMEESMKEISNYVADSIPDLNNNVT
YASVAAGSGNLVLPPNSGFQWVFLEDPHKRKSGMTQQQVYDKLVAASGRFRNVIVIPIQI
PTIGGFASNQPIEYVVQAPDLKSLIDVMPKLTGAAYGSKKLSFVNPDFKVNRPEISISID
RQRAAQLGISTQEIGRTLQLALSGRRYGYFIYNDRQYEVIGQLERSERSTPENLRSLFLK
SSNDEMVPLDNLVSLKEGISPPAIYRYNQSYSVTIQATPAPGVSMGEALEEMDKIAKDNL
PAGFRTSLAGQSRDYKESSSSLVFAFIFAIILIYLVLAAQFESLIDPFIILLTVPMAVTG
ALLSLWVSDSSINIFSQIGMIMLIGLITKNGILIVEFANHRKQEGLSVRDAVISAAASRF
RPILMTTLAMIFGALPIALSLGNSSGSRASLGIVVVGGLVFAGVLTLFVIPAVYSYFSRK
TKPVQNNTNGTAVSPVAPTLQHNTVLS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatttcacaaatgagcatctccaggccggtactggcgggggtgatgtcagtc
cttttgatcttatttggcatagtgggctacacgttcctcggtacacgtgagtatcctgta
acagattcgcccatcgtaaccgttaccacggtgtatcccggcgccagcgccgatatcatc
gcctcgcaggtgaccaaaccactggaagaagcgatcgccgaagccaacggcatccgcgcc
ctctcttctgtgagccgtgaacaggtgagcatcatcaccgtggaattcaatatgaatgcc
gatctcgaagccgcagccaatgacgtgcgcgataaggtttctaaatcacgtcagcagttg
cccacagatatcgagcctaccatcgtggagaaagctggtccgccggacttcctcgttttc
cttaccgtacagagtgataccaaaagtcttgaagacattacagactttgtaaccatcaat
atcaaagaacgcctgcaatccattcccggtgtgcgcttggtagatacctatgccggccgc
agacgcgccatgcgcctgagaatggaccccgttaaactttcatcctatggcctttctcct
gcagatattcagaatgcgctgcagcgtgagaacgtagatcttccaagtggacggatcgaa
ggacaacaaacagaaatgaccctccgcacgctggggcgactggtgaccgaagaggatttc
aataacatgatcatcagtgaaaaaaatggagctatcgttcgcttccgcgatgtaggacaa
gccatcatgagctcgcagaacgaacgcacagcgatgatcgtggcggaaggacaacaagcc
cgctatggcgtgggcacaggtgtgcagccacaacgtggcgccaactccctcgccatcgtg
gatgaattcaacaaacgtttcgaagacattatcaaatctgctccgaaggattacaatatc
aggcttggtaaagatttcaccgttcctgtaaagaactcactcgatgaagtggaagagact
ttgatactcgcattcggacttgttaccatcatcatcttcatcttcctgcgcgactggcgc
agtacgctgatcccgctggtagcgatccctgtatcaatcatctccgccttcttcatcatg
tacctggcggattactccatcaacgtactcaccttgctaggtcttgtattagcgattggg
ttggtagtggacgatgccatcgtggtacttgaaaatatctactcgaaagtggagcagggc
atgggtcctgtggaagcagcacggaaagggtcaaacgaaatttactttgccgttatctcc
actaccgttacgctcgccgctgtattcctgccgatcatgttcttaggtggtatcaccggt
aaactgttcaaagaatttgtggtggtggtagcaggttctgtactgatctccgcttttgtt
gcattgaccttgtcgcccatgatgagcgcatatctcctgaaagccggcgcacatcacaac
tggctctatcgcaaaacagaacctttcttcgtgaagctgaacaacggatatgagaacctg
ctacgcggattcatgcgattccgttggttaggatttgcattgctgttgttctctttcggt
atcgcctacctgctggcacccaagcttccctctgagctcgctccgctggaagaccgctcc
ctggttggattagcggtgattgcaccggaagggacatctttcgagagcatggaagaatcc
atgaaagagatcagcaactatgtagccgattccattcctgacctcaataacaatgtgacc
tatgcttcagtggccgccggtagcggaaacctcgttctacctcccaacagtggcttccaa
tgggtattccttgaagacccgcacaaaaggaagagcggtatgacgcaacaacaggtatac
gataaactggtagctgcgagtggacggttcaggaatgtgatcgtgatcccgatccagatc
cccactatcggaggattcgcttccaatcaaccgatcgaatatgtagtgcaggcgccggac
ctgaagagcctgatagacgtgatgccgaaacttaccggcgcagcttacggcagcaagaag
ctctctttcgtgaatcctgacttcaaagtgaacagacccgagatcagcatttccatcgat
cgtcagcgtgctgcacaactgggcatctccacacaggagatcggccgtacactgcaactg
gcgctcagtggtagacgttatggctacttcatttacaacgaccgtcagtatgaagtgatc
ggacaactggaaagatcagagcgatcaacgcctgaaaatctccgttcacttttcctgaaa
tcgtccaacgatgaaatggtgccgctggataacctggtgagtttgaaagaagggatcagc
ccgcctgccatctaccgctacaaccaaagctatagtgtgaccatccaggccacacctgct
cccggagttagtatgggagaggctttggaagaaatggacaagatcgcgaaagacaatctg
cctgcgggtttcaggacttcactcgccggtcagagccgcgattacaaggagagcagttcc
agtcttgtatttgcattcatcttcgccatcatcctgatctacctggtactggcagcacag
ttcgagagcctgatcgatccattcatcatccttcttactgttccgatggcggttaccggc
gcgttgctgagcctttgggtgagcgatagttccatcaatatcttcagccagatcgggatg
atcatgctgatagggttgatcaccaagaacggtatcctgattgtggaattcgcgaatcac
cggaagcaggaaggattgagtgtgcgcgatgccgttatatccgccgccgcgtcccgcttc
aggcccatcctgatgacaacgctcgcaatgatcttcggcgccctgcccattgccttgagt
ttaggaaattcatccggtagccgtgcatcactgggtattgtggtggtaggcgggctcgta
ttcgcaggtgtactcaccctcttcgtgatccctgctgtttacagttacttcagccgcaaa
accaaacccgtacaaaacaacacgaatggaactgcagtttcacctgtggctcccactctt
caacacaacacagttttatcatga
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