Pedobacter ginsengisoli: CPT03_00355
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Entry
CPT03_00355 CDS
T05145
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs01501
beta-Lactam resistance
pgs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPT03_00355
01503 Cationic antimicrobial peptide (CAMP) resistance
CPT03_00355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgs03036
]
CPT03_00355
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_00355
01504 Antimicrobial resistance genes [BR:
pgs01504
]
CPT03_00355
Chromosome and associated proteins [BR:
pgs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CPT03_00355
Transporters [BR:
pgs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CPT03_00355
Antimicrobial resistance genes [BR:
pgs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CPT03_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
OEP
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
ATP55024
UniProt:
A0A2D1U0J3
LinkDB
All DBs
Position
complement(86639..87805)
Genome browser
AA seq
388 aa
AA seq
DB search
MKTKIQSIYFLLPVLLIVSSCGSNDKKKDASAANQVQAYPVVTLTAQSTSLETDYPATIE
GIQNVDIRPKVDGFIEKIYVDEGALVKKGQRLFSIDAPQYEQLVRTATAAISSAEADVNA
AQLQVNKTKPLVEKDIISKYDLDAAQLTLQSRKAALAQAKAELVNAKVNLGYTTITSPVD
GVIGSIPFKTGSLVSGSTAEPLTTVSNISKVYAYFSLNEKQLLDFSRNYKGATLDAQMKN
IPAVSLVLADGSAFAENGKIESINGLINTNTGSASLRATFSNPSKLLRSGASASVRIPQH
LENAILIPQKSTTDLQGKKFVFLVDGKGIIKNTEIEIMENAKGNFYVVTKGLKTGDKIVL
EGFQSLKDGAEIKPEEKSADSVFADLKK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaagatccaatctatttattttttattgccagttttattaatcgttagttct
tgcggaagtaatgataaaaaaaaggatgcctcggcggcaaatcaggttcaagcctaccct
gttgttacattaacagcccagtctacatctcttgaaacagattatccggcaacaattgaa
ggcatacaaaatgtagacatcagacccaaagttgatggctttattgagaaaatttatgtt
gatgaaggagcccttgtaaaaaaaggccaacgcctttttagtattgatgccccgcaatat
gaacaacttgttagaactgcaaccgcagcaattagtagtgcagaggctgatgtaaatgca
gctcagctacaagttaacaaaacaaaacctctggttgaaaaggatatcatcagtaaatat
gatctggatgcagctcagctcacacttcaaagtagaaaagctgcactggcccaggcaaaa
gccgaactggtaaatgcaaaagtaaacctcggttacactaccattaccagccctgttgat
ggtgtaattggcagcattccttttaaaacaggtagcctggtaagtggcagcactgctgaa
ccactaaccactgtatcaaacatttcaaaagtttacgcttacttctcattaaatgaaaaa
cagcttcttgacttttcaagaaattataaaggggctactcttgatgcacaaatgaaaaat
atcccagccgtttctttagtattggctgacgggagtgcgtttgctgagaatggaaagatt
gaatctattaatggtttaataaatactaatactggctcagcaagcctaagagctactttt
tctaacccttcaaaacttttaagaagtggtgcaagtgcatcggtacgtatcccccagcat
ctggaaaatgccattcttattcctcaaaaatcaactactgatttgcaaggtaaaaagttt
gtttttcttgttgacggcaagggaatcatcaaaaatactgagatcgaaattatggaaaat
gcaaaaggcaatttttatgttgttaccaaaggacttaaaactggagataagatcgtgctt
gagggtttccaatctttaaaagatggtgctgagattaaacctgaagagaaaagtgcagat
tcagtattcgctgatcttaaaaaataa
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