Pedobacter ginsengisoli: CPT03_14915
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Entry
CPT03_14915 CDS
T05145
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPT03_14915 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_14915 (nth)
Enzymes [BR:
pgs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPT03_14915 (nth)
DNA repair and recombination proteins [BR:
pgs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPT03_14915 (nth)
Prokaryotic type
CPT03_14915 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF763
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
ATP57671
UniProt:
A0A2D1U7U8
LinkDB
All DBs
Position
3623579..3624259
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AA seq
226 aa
AA seq
DB search
MLKKERYKLFVAHFSAKQPDAETELHYNNPFQLLIAVILSAQCTDKRINQVTPALFKRFP
DARSLADVTPDIVFDYIRSVSYPNNKAKHLVGMAKMLLNDFNNEVPSDVNDLQKMPGVGR
KTANVIASVIYNAPAMAVDTHVFRVANRIGLTTGKTPLTVEKDLVKNLPEETIHVAHHWL
ILHGRYICVARSPKCSICEITSFCKYYQNTNKITKIFSDSEPSIKK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaaagaaagatataagctttttgtggcccatttttctgcaaagcaaccagat
gccgaaacagaattgcactacaacaatccatttcaattactgatagcagtaatcttatct
gctcagtgtactgataaaagaataaatcaggtaacacctgcattgtttaagcgctttccg
gatgccagatctttggctgatgttacacccgatattgttttcgattatatcagaagtgtt
agctacccgaataacaaggctaaacatttggttggtatggctaaaatgctgcttaacgac
tttaataacgaagtcccatctgatgtgaatgatttacagaaaatgcctggtgttggaaga
aaaacagcaaatgttatagcttctgttatctataatgcacccgctatggcggttgataca
cacgttttcagggttgcaaacaggattggattaactaccggaaaaactccactaactgta
gaaaaagacttagttaagaatttgcctgaagaaacaatacatgttgcacaccattggctg
atattgcatggcaggtatatatgtgtggcaagatctccaaagtgtagtatctgcgaaatc
acaagtttttgcaaatattatcaaaacacgaataaaataactaaaatatttagtgattca
gaaccctcaataaaaaaataa
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