Pedobacter ginsengisoli: CPT03_20610
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Entry
CPT03_20610 CDS
T05145
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CPT03_20610
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgs01007
]
CPT03_20610
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgs03016
]
CPT03_20610
Enzymes [BR:
pgs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
CPT03_20610
Amino acid related enzymes [BR:
pgs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CPT03_20610
Transfer RNA biogenesis [BR:
pgs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CPT03_20610
Prokaryotic type
Other AARSs
CPT03_20610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
Cas6b_C
tRNA-synt_1f
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ATP58693
UniProt:
A0A2D1UAR7
LinkDB
All DBs
Position
complement(4900440..4903832)
Genome browser
AA seq
1130 aa
AA seq
DB search
MYREFKQLELAKIAKEILDFWKAENIFEKSISTRSKSNPFTFYEGPPSANGMPGIHHVMA
RAIKDIFCRYKTIKGFQVKRKAGWDTHGLPVELGTEKELGITKEDIGKTISIEAYNEACK
RTVMRYTDVWNDLTEKMGYWVDMDDPYITYKSKYMESVWWLLKQIYDKGLLYKGYTIQPY
SPKAGTGLSSHEVNQPGAYRDVTDTTIVAQFKTLPDTLPAFLKEFGEIHLMAWTTTPWTL
PSNTALTVGPKIDYVLVKTFNQYTYLPINVILAKNLVGKQFNKTYFESTAAEDFSNFKEG
DKKIPYQILAECKGADLVGIKYEQLLPYALPYQNPENAFRVISGDFVTTEDGTGIVHTAP
TFGADDAKVAKEAVPEVPPMLVLDENGSPVPLVDLQGRFTAQLGDLAGKYVKNEYYEEGE
APEKSVDVEIAIRLKEENKAFKVEKYVHSYPHSWRTDEPLLYYPLDSWFIKVTDIKDRMF
DLNETINWKPKSTGEGRFGNWLKNANDWNLSRSRYWGIPLPIWRTEDKREEIIIGSVEEL
YNAIEQSIATGFMTANPFKGFEIGNMSEANYDLVDLHKNVVDDIILVSPSGKPMSRESDL
IDVWFDSGAMPYAQWHYPFENKDKIDEQQDFPADFIAEGVDQTRGWFYTLHAIGALVFDK
IAYKNVVSNGLVLDKNGQKMSKRLGNAADPFKTLEEYGPDATRWYMISNANPWDNLKFDI
EGIAEVRRKFFGTLYNTYAFFALYANIDKFEIDQDNLTPVAERSELDRWILSLLQTLIAE
VDESYAAYEPTKAARAIQSFVDEHLSNWYIRLSRRRFWKGEMTADKKAAYETLYACLTSI
SQLMSPIAPFFADWLFQNLTAGDAANDVQSVHLALLKEADQSLIDTELNERMHLAQDISS
MVLSLRKKTGINVRQPLAKILIPVLDNKFAGRVDLVKELILSETNIKDIEYITDTAGFIT
KKIKPNFKALGPKVGKDMKMVAEVVNNLTQKQLSQFENEGKYQITGTNYVIELSDVEIIA
EDIPGWQVTNMGNLTVALDVTITEELKQEGLSRELINRIQNLRKELNFEVTDRITVTLQN
HNLVAAAVAQNKIYICSEILADELKLTESLDNGNKIVIDDVELQISIAKQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtatagggaatttaaacagttagaactagcgaaaatagcaaaagagatacttgatttt
tggaaagcggagaacatctttgaaaaaagcatttcgacgagatcaaaatcaaatccattt
actttttacgaaggcccgccttcggcaaacggaatgcctggtattcaccacgtaatggcc
cgtgctattaaagatattttctgccgttataaaaccattaaaggatttcaggtaaaaaga
aaagcaggatgggatacccacggacttccggtagaactgggaactgaaaaggaacttggt
attaccaaagaagatataggcaagaccatttcaattgaagcttacaatgaagcctgcaaa
aggacagtaatgcgctacacagatgtgtggaacgaccttactgaaaaaatgggctattgg
gtagatatggatgacccttatattacctacaaatcgaaatacatggagtcggtttggtgg
cttttgaaacagatctacgataaaggtttgttgtataaaggctataccatccagccttac
tccccaaaagcaggaacaggattaagctcacatgaggtaaatcagccgggagcttatcgc
gatgtaaccgacactacaattgtagcccagtttaaaaccctgcctgatacattacctgct
ttcctgaaagaatttggagagatacatttaatggcctggacaaccacaccatggactttg
ccatcaaacacagccttgactgtggggccaaaaatagattatgtactggtaaaaacgttt
aatcagtatacctatcttcctataaatgtaatcttagccaagaatctggtaggaaaacag
tttaacaaaacttactttgaaagtactgctgccgaggatttcagtaattttaaagaaggc
gacaaaaaaatcccttatcagattttagcagaatgtaaaggggctgatcttgtaggcatt
aaatatgagcagcttttgccttatgctttaccatatcagaatcctgaaaatgctttccgt
gtgatctcgggagattttgtaactacagaggatggaacaggtatagtacatacggcaccg
acctttggtgctgatgatgctaaagtagctaaggaagcagtacctgaggtaccgcctatg
ctggtgctggacgaaaatggttcgccggttccattggtagatttgcagggaagatttacg
gctcaactgggcgaccttgccggaaagtatgtgaaaaatgaatactatgaggaaggtgaa
gctccggagaaatctgtagatgttgagattgctattcgtttaaaagaagaaaataaagca
tttaaagtagagaaatacgttcacagttacccgcacagctggagaactgacgagccactg
ttgtattatccgctggactcatggttcatcaaggtaactgacatcaaagacaggatgttt
gacctgaatgagaccatcaactggaaaccaaaatcgacaggtgaaggacgttttggaaac
tggctgaaaaatgcaaacgactggaatctttcgcgctcgagatattggggaattccatta
ccgatctggagaacggaagacaaaagagaagaaataataattggctcagttgaagagtta
tacaatgccatagagcagtcgatagccaccggctttatgacggcgaatccttttaaaggg
tttgagatcggcaatatgtcggaagcaaattatgacctggtagacctgcacaagaatgtg
gtagacgacattatattggtttcgccttcagggaaacctatgagccgtgaaagtgatctt
atcgacgtttggtttgactcaggggctatgccttatgcacagtggcattatccttttgaa
aataaggacaaaattgatgagcaacaggatttcccggccgattttatagctgaaggtgtt
gaccagacccgcggatggttctataccttgcacgccataggggcattggtttttgataaa
attgcgtataaaaacgtggtttcgaatggattggtactcgataaaaacgggcaaaaaatg
tcgaaacgcttaggcaacgcggctgatccgtttaagacactggaagagtacggaccggat
gctacgcgctggtacatgatatcgaacgcaaacccttgggataacctgaaatttgatatt
gaaggaattgcagaggtacgccgtaaattctttggaacactttacaatacctacgctttc
tttgcattgtatgcgaatattgacaagtttgaaatagaccaggataacctgactccggtt
gctgaacgcagtgagcttgacagatggatattatcgcttttgcaaacgcttattgcggag
gtagacgaaagttatgctgcttacgaaccaacaaaagcggcaagggcaattcagtcgttt
gtagacgagcacctgagtaactggtatattcgtttatcacgccgccgtttctggaagggc
gagatgacagccgataagaaagcagcttatgaaactttatatgcctgcctgaccagtatc
tcacaactaatgtcgcctatagcgcctttctttgcagattggttattccagaatttaact
gccggagatgcggctaatgatgttcaatctgttcaccttgccttacttaaggaagctgac
cagagtttaattgacacggaacttaatgagcgtatgcatctggcacaagacatatcatca
atggtattgtcgctgcgtaaaaaaacaggcatcaatgttcgtcagcctttggctaaaatc
ctgattcctgttcttgataacaaatttgccggacgtgttgatttggttaaagaattaatc
ctatcggaaacgaatattaaggatattgagtatattaccgacactgccggtttcattacc
aaaaagatcaaacctaactttaaagcattaggccctaaagttggtaaagacatgaaaatg
gttgctgaagtggtgaacaacttaacacagaaacaattgagtcagtttgaaaatgaaggg
aaatatcaaattactggcactaattatgttatcgagttgagcgacgtagagatcattgct
gaggatataccgggatggcaggtaaccaacatgggcaacttaactgtggctcttgatgtt
acaataaccgaggaattgaaacaggaaggattgtcgcgtgaactaattaacagaattcag
aacttaaggaaagaacttaatttcgaagttacagatagaattactgtgactttacaaaac
cataatttagtagctgcagctgtagctcaaaataaaatatacatttgctcggaaatttta
gcagatgagcttaaattaacagaaagtctagataacggaaacaaaatagtaatcgatgat
gttgaattacaaatttcgattgccaaacaataa
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