Porphyromonas gingivalis TDC60: PGTDC60_1135
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Entry
PGTDC60_1135 CDS
T01516
Symbol
kamD
Name
(GenBank) D-lysine 5,6-aminomutase, alpha subunit
KO
K01844
beta-lysine 5,6-aminomutase alpha subunit [EC:
5.4.3.3
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00310
Lysine degradation
pgt00470
D-Amino acid metabolism
pgt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PGTDC60_1135 (kamD)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGTDC60_1135 (kamD)
Enzymes [BR:
pgt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.3 Transferring amino groups
5.4.3.3 lysine 5,6-aminomutase
PGTDC60_1135 (kamD)
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Gene cluster
GFIT
Motif
Pfam:
Lys-AminoMut_A
Motif
Other DBs
NCBI-ProteinID:
BAK25292
LinkDB
All DBs
Position
complement(1176403..1177974)
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AA seq
523 aa
AA seq
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MQKSKVGIDFSKVEYARSIAGEIAGNVQTFVEQYTTVAVERTLCRLIGIDGVDGNAVPLP
NVLVDHLKDRNVLGHGALFFLANGIVATGKSPQEIAESVAVGEVDLTSYPFCPANVIADT
LAPLITGGMQKIAANRKRREDYIETLGEGPRPYLYVIVATGNIYEDVVQAQAAARQGADI
IAVIRTTGQSLLDYVPYGATTEGFGGTFATQENFRIMRKALDEVGEEVGRYIRLCNYCSG
LCMPEIAVMGALEGLDVMLNDALYGILFRDINMQRTLVDQYMSRVINGFAGVIINTGEDN
YLTTADAVEEAHTVLASDLINEQLALTAGLPSEQMGLGHAFEMDPMLENGFLFELAQAQM
TREIFPKAPLKYMPPTKFMTGNIFRGHLQDALFNIIGVWTSQGIQLLGMPTEAIHTPFMS
DRYLSIENAKYIFSNMKNIGSEVEFKEGGIVQSRAREVLDKTVNLLERLKEEGLFSALEK
GIFGDVKRPMNGGKGLSGVAKKELHYYNPTIELMKNFNMSGKL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaagtaaagtcggaattgatttttccaaggtagaatatgccagaagcattgcc
ggagaaatagccggtaacgtacagacattcgtcgaacaatacacgactgtagccgtggaa
cgcaccctctgtcgcctaatcgggattgatggagtggatggcaatgctgttccactgccc
aatgtattggtcgaccatctgaaagaccggaatgttttggggcatggtgctctgttcttt
ttagcaaatggaatagttgctacgggaaaatctcctcaagaaattgctgaaagtgtggct
gtcggcgaagtggatcttacctcttacccattctgtcctgccaatgtcattgcagataca
ttggcaccgctcataacaggagggatgcaaaaaatagctgccaacagaaagagaagagag
gactacatcgagactctcggagaagggcctagaccttatctctacgttattgttgctacc
ggtaatatatatgaagacgttgttcaagcacaagcagctgctcgccaaggagccgatatt
attgccgtaatacgtactacgggacagagtttgctcgactacgttccttacggagctacg
acagaaggattcgggggtacttttgctacacaagaaaacttccgtatcatgcgaaaagcc
ttggatgaggttggagaagaggttggtcgatatatcaggctctgcaactattgttcaggt
ctttgcatgccggaaatagccgtaatgggagcactcgaaggcttggatgtaatgctcaat
gatgctctctatggaattcttttccgagacattaatatgcaacgtactttggtggatcaa
tacatgagtcgtgttatcaatggatttgccggcgttatcatcaataccggtgaggataac
tacctaaccactgctgatgccgtagaagaagcacataccgtacttgcctcggatttgatc
aatgagcagctggctcttacagccggattgccttcagaacagatggggcttggacatgca
tttgaaatggatcccatgctcgagaatggattccttttcgaattggctcaagcacaaatg
accagagaaattttccccaaagctccgcttaagtatatgcctcccacgaagttcatgacc
ggcaacattttccgtggtcatttacaggatgcgcttttcaatataatcggtgtatggacc
tctcagggtatccaactgctcggtatgcctaccgaagctatccatactccttttatgagc
gaccgctatctttcgatcgaaaatgccaaatatattttctccaatatgaagaatatcgga
tcggaagttgagttcaaagaaggcggtatcgtacagagccgagcacgtgaagtgcttgac
aagaccgtgaatttgcttgaaagattgaaggaagaaggtctcttctctgctttggaaaaa
ggtatttttggtgatgtaaaacgcccgatgaacggaggaaaaggtttgagcggtgttgcc
aagaaggaattacactactacaacccgacaatcgagctgatgaaaaactttaatatgagt
ggtaagttatga
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