Porphyromonas gingivalis TDC60: PGTDC60_1364
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Entry
PGTDC60_1364 CDS
T01516
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGTDC60_1364 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgt03400
]
PGTDC60_1364 (nth)
Enzymes [BR:
pgt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PGTDC60_1364 (nth)
DNA repair and recombination proteins [BR:
pgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGTDC60_1364 (nth)
Prokaryotic type
PGTDC60_1364 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF2400
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BAK25514
LinkDB
All DBs
Position
complement(1410236..1410910)
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AA seq
224 aa
AA seq
DB search
MRKEERYKAVIDWFAENMPVAETELRYRDPFQLLVAVILSAQCTDKRVNMVTPALFSAYP
TAKDMAGSTVEDLLSYIGSISYPNSKAKHLVGMAQMLCSDFGGVVPDEVSELTKLPGVGR
KTANVIASVVYGKPAMAVDTHVFRVSERIGLTTGSKSPLETERELVRYIPDVLIPKAHHW
LILHGRYVCLARKPKCADCGIAPFCRYYSKVFKKNSTALPKKGE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggaagagcgatacaaagccgttatcgattggtttgccgagaatatgccggtg
gccgaaacggagctgcggtaccgggatcctttccagttgctggtggccgttattctctcg
gcacaatgtaccgacaagcgcgtcaatatggtgacaccggctctcttttctgcctatccg
acagcaaaggatatggccgggagcacggtggaggatttgttgtcttatataggaagcatc
agctatccgaacagcaaagcgaaacatctggtcgggatggcgcagatgctttgctctgat
tttggaggagtggtaccggacgaggtgtcggaactaaccaaactgcccggcgtaggccgt
aagacagccaacgtgatagcctccgtcgtctacggcaaaccggccatggccgtagatacg
cacgtattcagagtatcagaaaggataggcctgaccaccggttcgaagtctccgttagag
acggagcgagagctggttcgctatattccggatgtgctgataccgaaagctcatcactgg
ctgatcctgcatggacggtacgtttgtctggctcgcaagcccaaatgtgcagactgtggc
atagcaccattctgccgctactactcgaaagtttttaagaagaacagtacagcccttccg
aaaaaaggggaatga
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