Pantherophis guttatus (corn snake): 117655249
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Entry
117655249 CDS
T07329
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04010
MAPK signaling pathway
pgut04020
Calcium signaling pathway
pgut04510
Focal adhesion
pgut04540
Gap junction
pgut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117655249 (PDGFRB)
04020 Calcium signaling pathway
117655249 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117655249 (PDGFRB)
04540 Gap junction
117655249 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117655249 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pgut01001
]
117655249 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgut04090
]
117655249 (PDGFRB)
Enzymes [BR:
pgut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117655249 (PDGFRB)
Protein kinases [BR:
pgut01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117655249 (PDGFRB)
CD molecules [BR:
pgut04090
]
Proteins
117655249 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
V-set
Motif
Other DBs
NCBI-GeneID:
117655249
NCBI-ProteinID:
XP_060544503
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MPAFFRKMLVFLVLFLTSVKEISSLEITPSAHEVVLNLYTDFTLKCSGNDEVNWETDNKH
TKLDTVLEKRGTIFTNTLTLRNLTGLNTGEYFCTSNQPLDGKAIYIFVPDLSMPFLPSTQ
EDTFVFSTGFVEVIIPCRVTNPNATVSLHEKRVNDPVPGMYFPQQGFKGQFEDKAYICKA
TIEDEEFESETFYVYNIEVSSTPTSFINVSISAVQTILKQGENIIVTCTVKGIELISYIW
SYPGQMVGKEVEPVTHIVPGVKHHTNSILTIPNADFDDQGLYVCETTDTYFGQKEEKSIF
IRVIERGFVTFHTVLNETVFAELHKSHTFLIQIEAYPTPTIIWFQNNKPLTSESNSDFAI
NSRNLSETRYQTTLTLVRVKASEGGLYTVRAFHEDDSKELFFHLQINVPATVTELRDSSN
KTNGEQTVICTTEGMPQPEVTWYTCNNDKWCAGATTKILGNTSEEMNLQTNFTYEDDRKI
YVVTSKLHFHRVDEPIFIQCAAQNLLGAHTQQITLVPYNLPFKVIVISVIVAFVILMVLF
LVILIFLWRKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDRLVLGRTLGS
GAFGRVVEAIAHSLSHSQSTMRVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLL
GACTKGGPIYIITEYCRNGDLVDYLHRNKHTFLQCYSEKAKQEAELYGNGMRVDRLQSHT
SISVESDGGYMDMSKDESLDYVPMSDMKGEIKYVDIDSSNYGATYELDSYSPSASEKATL
ISESPLLTYIDLVGVSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MRDSNYISKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMND
QFYNAIKRGYRMSKPTHASNEIYEIMQKCWEEKFEIRPSFSQLVLLMGNLLTDSYKKKYQ
QVNEEFLKSDHPAIMRTRPRNTGFSPSRSTASDSVSSSSVLYTAVEQNGVDNDYIIPLPD
PKPEGDNNNPPEASSSRASSTLNEANTSSTISCDSPLAPEQEEEQASESKSDC
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttctttcggaaaatgctagtcttcttggtcctcttcctcacaagtgtgaaa
gaaatcagctccctggaaattactcccagtgcccacgaagttgtcctcaatctctacact
gattttaccctgaaatgttcaggcaatgacgaggttaactgggaaacagacaacaagcat
accaaattagacactgtgctggagaaaaggggcaccatttttaccaacaccctcacgtta
aggaacttgactggtttgaacacaggtgaatatttctgtaccagcaatcaacccctggat
ggaaaggccatctacatttttgtgccagatctctccatgcctttcctaccaagcacccag
gaagacacctttgtgttcagcacaggctttgttgaagtcattattccttgccgtgtgaca
aaccccaatgccacggtctctcttcatgaaaagagggttaatgatccagtccctggaatg
tattttccacagcaaggctttaaaggacagtttgaagacaaagcctatatctgcaaggca
acgatagaagatgaagagtttgagtctgaaacattctatgtctacaatatcgaagtttct
tccactcctacatccttcatcaatgtttctatcagtgcggtgcaaactattttgaaacaa
ggtgaaaatatcattgtgacatgtaccgtaaagggcattgagttgatcagttatatctgg
agttatcctggacagatggtaggcaaggaagtagaacccgtgacacatatcgttccagga
gtcaaacatcatactaattccatcctaaccattccaaatgcagactttgatgatcaaggt
ctatatgtatgtgagaccacggatacatattttggacaaaaagaagaaaaaagtatcttt
atcagagtgattgagcgtggctttgtgacttttcacactgttctgaatgagaccgtattt
gcagaactccacaaaagtcacacctttttgatacagatcgaagcctatccaactccaacc
atcatctggtttcagaataacaagcccctgacttctgagagcaacagtgattttgctatc
aacagcaggaatttgtcagaaaccaggtatcaaactactctgaccctcgtaagggtgaaa
gcaagtgagggaggtttgtacactgtccgagcatttcacgaagatgactcaaaagagctc
ttctttcatttgcagattaatgtcccagctacagtgactgagctgagagacagtagcaac
aaaacaaatggtgagcaaacagtgatttgtactacagaaggaatgccccaaccagaggtt
acctggtatacctgtaataatgacaaatggtgtgcaggagcaactactaagatcctggga
aacacctcagaagaaatgaatctgcaaacaaatttcacttatgaagatgaccgaaaaata
tatgttgtgacaagcaagctccactttcacagagtagatgagcctatctttatccaatgt
gcagctcaaaatctccttggtgcacacactcagcaaatcacactggttccatacaatcta
ccttttaaagtgatcgttatttcagtaatcgtggcttttgtgattcttatggttcttttc
ctggtgatcctcattttcttgtggcgaaaaaagcctcgatatgaaattcgctggaaggtg
attgagtccgtcagctctgatgggcatgaatatatctacgtggaccctatgcaactgcct
tatgattccagctgggaggtcccaagggacaggctggttttaggacgtacattgggctct
ggagcctttggccgtgtggtggaagcaattgctcacagcctcagccattcccagtccacc
atgagagttgctgtgaaaatgctcaagtccacagcccgaagcagtgaaaagcaggctctg
atgtcagaactgaagatcatgagccaccttgggcctcacttgaacattgtgaacttgctt
ggtgcttgcaccaaaggaggtcccatctacatcataaccgaatattgtcgcaatggagac
ctggtggactatctacacaggaacaagcacaccttcctgcagtgctacagtgagaaggcc
aagcaagaagcagaattgtatgggaatggcatgcgtgtggaccggctgcaaagccataca
tccatatctgtagaaagtgacggaggctacatggacatgagtaaggatgaatcactggat
tatgtgcccatgtctgacatgaagggtgaaatcaagtatgtagacattgattcttccaat
tatggtgcgacctatgagctggacagctattcgccttcagcttcagaaaaagcgaccttg
atcagcgagtctcctcttctcacctatattgatcttgttggagtcagcttccaagtggct
aagggaatggagttcttagcttctaaaaactgtgtgcaccgtgatctggctgcaagaaac
gtactgatctgcgaagggaaactggtgaagatctgtgactttggcctagccagggacatc
atgcgggattcaaattatatttccaaaggaaataccttcttgcctttgaaatggatggcc
cctgagagcatcttcaacaacctctacactaccttaagtgatgtgtggtctttcgggatt
cttctatgggaaatattcactctaggtgggactccatatcctgaactgcctatgaatgac
caattctataatgctattaaacgtggctaccggatgtccaaacctacccatgcatccaat
gaaatctatgaaattatgcagaaatgctgggaagagaagtttgagattcgaccttctttc
tctcaactggtacttcttatggggaacctgctaacagacagctataagaagaagtatcaa
caggtcaacgaagagttcttgaaaagtgatcaccctgctattatgcgtacaaggcccagg
aacacaggattcagtccttctaggtccactgcaagtgacagtgtcagttcaagttctgtc
ctctatacagctgtggagcagaatggagtggacaatgattatatcattcctttacctgat
ccaaaaccagagggagacaataataaccctccggaggcctctagcagcagagcaagttca
actctgaatgaagcaaacacttcatctactatatcttgtgacagtcctttagcccccgag
caagaagaagaacaagcatctgagtcaaaatcagattgctag
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integrated database retrieval system
