Pantherophis guttatus (corn snake): 117664755
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Entry
117664755 CDS
T07329
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117664755 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgut03041
]
117664755 (EFTUD2)
Spliceosome [BR:
pgut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117664755 (EFTUD2)
Complex C
U5 SnRNP specific factors
117664755 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
117664755
NCBI-ProteinID:
XP_034271914
UniProt:
A0A6P9BPJ2
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDEMGRESKDLDEPDDDDDDDDMGDHDEDHPGMDVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFASSQYSICFTLGSFAKIYADMYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKIGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAEQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacctatatgatgaatttggaaattatattggtccagagcttgattctgat
gatgatgatgatgaaatgggtcgtgagtcaaaagatcttgatgagcctgatgatgatgat
gatgacgatgatatgggagaccacgatgaagaccaccctgggatggatgtagtgttacat
gaggataagaaatattatccaacagctgaggaggtatatggtcctgaagtagaaactata
gtgcaggaagaagatacacagcctcttacagaacctattattaaaccagtgaagaccaag
aaattttccctcatggagcaaacattgccagttacagtatatgaaatggattttcttgca
gatttgatggacaactcagaactgatccggaatgttacactttgtggacacctacaccat
gggaagacttgttttgtggattgcctgatcgaacagacacatcctgagatcaggaagcga
tacgaccaggatctttgctatacagacattctattcactgagcaagaaaggggtgttggg
attaaaagcacaccagtgaccattgtccttccagataccaagggcaaatcatttctcttc
aatatcatggatacacctggtcatgtaaacttctctgatgaggtcacagcaggtcttcgc
atttctgatggtgtggtacttttcattgatgcagctgagggggtcatgctgaacactgag
cggttaatcaagcatgcagtacaggaaagattggcagtgacagtgtgtattaacaagatt
gatcggctgatattagaactgaagctgccacctactgatgcctattataagctgcggcac
atagtggatgaagtcaatggcttaatcagcatgtattccacagatgagaacctgatcctt
tcacctcttttgggcaatgtctgttttgccagctctcagtatagcatttgtttcacactg
ggttcctttgccaagatatatgctgacatgtatggagacatcaattaccaggagtttgct
aagcgactgtggggagatatttatttcaaccccaagacgagaaaattcactaaaaaagca
ccaacaagtagttcccagcgaagctttgtggaatttattcttgagcctctttacaaaatc
ctggcccaggtagtaggagatgtagatactaccttgcctcgaactttggatgaactcgga
attcatctgaccaaggaagagttgaaattaaacatccgccccctcttgaggcttgtgtgc
aagaaattctttggagagttcacaggttttgtggatatgtgtgtgcaacacatcccctcc
cctaaaataggggcaaagaccaagattgagcatacttacacaggcggagttgactctgac
ctaggagaggccatgagtgaatgtgatcctgatggtccacttatgtgccacactacgaaa
atgtatagtacagatgatggggtccaattccatgcatttggtagggtgttaagtggaacc
atccatgcagagcaacctgtcaaagtccttggagaaaactacactctagaagacgaagaa
gattcacagatttgcactgtgggacgcctttggatctctgtagcaaggtaccatatagaa
gttaatagagtgccagctggtaactgggtgcttattgagggagtagaccagcctattgtg
aagacagccactgtcactgagcccaggggcaatgaagaggctcaaatattccgtcctttg
aagttcaataccacatctgtgatcaaaatagctgtggagcccgtaaatccatctgagctc
cccaaaatgttggatggcttgcggaaagtcaataaaagctatccctctctcactaccaag
gtagaagaatctggggaacatgtgatcttgggaacaggagagctctatcttgactgtgta
atgcatgatcttcggaaaatgtattcggagattgatatcaaggtagctgatcctgtggtc
acattctgtgagacagttgtggaaacatcttccctgaagtgttttgctgagacacccaat
aagaaaaacaagattacaatgattgctgagcctctagaaaagggtctagctgaagacatt
gagaatgaagttgtgcaaataacatggaacaggaaaaagctgggtgagtttttccagaca
aaatatgactgggatttgttggctgctcgttctatctgggcctttggaccagatgctact
ggaccaaacatcttggtggatgataccttaccctcagaggttgacaaaacccttttaggt
tctgtgaaggacagtattgtgcaaggcttccagtgggggactagggaagggcccctatgt
gatgaattgatccgcaatgttaaatttaagatattggatgctgttattgctcaggaacca
ctacatcggggaggtggacagatcattccaacagcccgtcgagtggtgtattctgccttc
ctcatggccacaccacggttaatggagccatattattttgtggaggtacaggctcctgct
gactgtgtctctgcagtgtacactgttctggccaggcgtagaggccatgtgactcaagat
gcaccaatcccaggatcccctctgtatactatcaaagcctttatcccagctattgactca
tttggatttgagacagacctcaggacacatacccagggacaagcattctcactctctgtc
ttccaccactggcaaattgtgccaggtgatcccctggacaagagcatcgtgatcagacct
cttgagccacagccagccccccacctggccagagaatttatgatcaaaactagacgcagg
aagggtctgagtgaggatgtgagcatcagcaagttcttcgatgaccctatgttgctggaa
ttggccaaacaggatgtggtactgaactatcccatgtaa
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