Pantherophis guttatus (corn snake): 117665476 Help Entry 117665476         CDS       T07329                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pgut  Pantherophis guttatus (corn snake) Pathway pgut04010   MAPK signaling pathway pgut04120   Ubiquitin mediated proteolysis pgut04140   Autophagy - animal pgut04144   Endocytosis pgut04620   Toll-like receptor signaling pathway pgut04621   NOD-like receptor signaling pathway pgut04622   RIG-I-like receptor signaling pathway pgut05132   Salmonella infection pgut05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pgut00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     117665476 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     117665476 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     117665476 (TRAF6)    04140 Autophagy - animal     117665476 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     117665476 (TRAF6)    04621 NOD-like receptor signaling pathway     117665476 (TRAF6)    04622 RIG-I-like receptor signaling pathway     117665476 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     117665476 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     117665476 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pgut04131]     117665476 (TRAF6)    04121 Ubiquitin system [BR:pgut04121]     117665476 (TRAF6) Enzymes [BR:pgut01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117665476 (TRAF6) Membrane trafficking [BR:pgut04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     117665476 (TRAF6) Ubiquitin system [BR:pgut04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     117665476 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 TRAF6_Z2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 Med21 zf-RING_5 SlyX TRAF3_RING RING_XB3-XBAT31 DUF16 TRAFD1-XIAF1_ZnF zf-RING_11 U-box zf-TRAF_2 DUF4455 UPF0242 DUF1664 DUF7310 ATG16 CENP-F_leu_zip PspA_IM30 Motif Other DBs NCBI-GeneID:  117665476 NCBI-ProteinID:  XP_034273280 UniProt:  A0A6P9C0N6 LinkDB All DBs Position Unknown AA seq 548 aa AA seqDB search MSLLHSNTSFEINDQESDCCAAMASACSAGTKEESFTAPISNGTGGTLSNSFMEETQGYD VEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLENQL FPDNFAKREILSLTVKCPNKGCSQKMELRHLEDHELHCGFASEKCSQCQGIFQKNQLQEH IKLECPRRQIACPNCAMCMPYEEKKVHDEICLLANVFCTYCNTALIREQLPNHYDNDCPI APVPCTFSAFGCLEKMKRNDLARHMQEFTQVHMRMMAQTLRSISVTTPTSMNFSGTLPFD PSLFSQGMPPSCECSPEVQNFKETIQQLEGRLVRQDHQIRELIAKMETQHSQMGDLKRTI RTLEEKMADIEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPGFYTGKPGYKLCLRLH IQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQSEGSPRHNHEEVMDTKP ELLAFQRPMVHRNPKGFGYVTFMQLQALKQRTYIKDDILLVRCEVLTRLDLTSLRREGFQ PRSTDGTS NT seq 1647 nt NT seq  +upstreamnt  +downstreamnt atgagtctactacatagtaacacaagttttgaaatcaatgatcaagagagtgactgctgt gcagccatggccagtgcttgcagtgctgggaccaaggaggaaagcttcactgcccccatc agcaatggtactggtgggacactttcaaactctttcatggaggaaacccaaggctatgat gtggagtttgacccaccactggaaagtaaatatgaatgccctatctgtttaatggctcta cgggaagcagtacagacgccatgtggacatcgtttttgcaaagcttgcattgtcaaatcc ataagagatgcaggtcataaatgtccaatagacaatgaaatcttactagaaaatcaactc ttccctgataactttgcaaaacgtgaaatcctctcactgacagtgaaatgtcccaacaaa ggctgcagtcaaaagatggagctaaggcacttagaggatcatgagttacattgtggattc gcatcagaaaaatgttctcaatgtcaagggattttccagaagaaccagttgcaagaacat attaagctagaatgtccacggcggcaaattgcttgtccaaattgtgccatgtgtatgcct tatgaagaaaaaaaggttcatgatgaaatatgccttttggcaaatgtcttctgtacatat tgtaatacagcgctaatcagagaacagctgcctaatcattatgataatgactgccctatt gctccagtaccatgtacttttagtgcatttggatgtctcgaaaagatgaagagaaatgat ttggcgcgccacatgcaagaatttactcaggttcatatgagaatgatggctcagactctt cggagcatcagtgttactactccaacttccatgaatttttctggaactttaccctttgac ccatcactcttctctcaaggcatgccaccctcgtgtgagtgtagcccagaggtccagaac ttcaaggagactattcagcaactggaaggtcgcttggtaaggcaagatcaccaaattaga gaactcattgcaaaaatggagacacaacactcccagatgggagatctcaaacgcaccatc cgaactctagaggaaaaaatggctgacattgaagcccaacaatgtaatggtattttcctg tggaaaattgaaaatttcagtgcatacctgaaagcccaggaggaagaaagacccgttgtg atccatagtccaggtttctacacagggaaaccaggatataaactttgcttgcgtctgcat atccagttaccaagcgctcaacgttgtgctaactacatttctctttttgttcataccatg caaggggactatgacagtcatctcccttggcctttccaaggcaccatacgtctatcaatt ttggatcagtctgaaggatctccaagacacaaccatgaagaagtaatggataccaagcct gagttgctagccttccaacgtcctatggtccatcgcaacccaaagggttttggatatgta acttttatgcagttgcaagccctaaaacaaagaacatacataaaagatgatattctcttg gtacgctgtgaagttttaacacgtttggacttaaccagtctccgaagagaaggttttcag cctcgtagtacagatggaacatcatag

DBGET integrated database retrieval system