Pantherophis guttatus (corn snake): 117665703 Help Entry 117665703         CDS       T07329                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism pgut  Pantherophis guttatus (corn snake) Pathway pgut04115   p53 signaling pathway pgut04145   Phagosome pgut04148   Efferocytosis pgut04350   TGF-beta signaling pathway pgut04510   Focal adhesion pgut04512   ECM-receptor interaction pgut04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pgut00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     117665703 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117665703 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     117665703 (THBS1)    04148 Efferocytosis     117665703 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     117665703 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     117665703 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     117665703 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pgut04131]     117665703 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pgut00536]     117665703 (THBS1) Membrane trafficking [BR:pgut04131]  Endocytosis   Phagocytosis    Opsonins     117665703 (THBS1) Glycosaminoglycan binding proteins [BR:pgut00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117665703 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  117665703 NCBI-ProteinID:  XP_034273781 UniProt:  A0A6P9C269 LinkDB All DBs Position Unknown AA seq 1167 aa AA seqDB search MELSGGLFLLLMLGVSTTNRIPETSDDNSVYDFFELIGFGRKGAHKGLGVHSIKGLETSS PAYRIDDANRIPAVSDHKFQDILYSIQAEKGFILLANLRPIKKDAGTILAVERKDNSGYV FKLVLNGKAKTLDLSVFPDEGNQSLVSVEDVKLPIARWSSITLFVQEDQAQLYVGCEKMT NVELEIPIQDIFTRDLSNRARLRIAKGGVNDNFQGMLQNVRFVFGTSLETILRNKGCQIS TGTLIKLDNPMNGSSPAIRTNYIGQKTKDICGFSCDDLTKMFLELQSLRALVIKVQDSVN HMELIAPPYIKKGICLHNNVVYENAAEWTTDTCTTCTCQNSAVMCHKVSCPLMPCSNATV PDGECCPRCWPSDSADDAWSPWSEWTTCSTTCGNGIQQRGRSCDRINHLCEGSSVQTRIC NMQECDKRFRQNGGWSHWSPWSSCSVTCGTGLITRIRLCNSPLPQMGGKTCEGEARENMP CQKSPCPINGNWGPWSPWDACPITCGGGIQKRSRLCNNPEPQFEGKDCIGDATATQMCNK QDCPIDGCLSNPCFAGTKCTSFLDGSWKCGPCPAGYQGNGIRCKDIDECQEVPDTCFVLS GVHRCENTVPGYHCQPCPSRFTGTQPFGQGVEDAMANKQECKPRNPCADGTHTCNKYAKC IYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLHCVANATYHCTKDNCPNLPN SGQEDYDDDGIGDACDDDDDNDNIPDDRDNCPFNYNPQQYDYDRDDVGDRCDNCPYNHNP LQIDTDQNGEGDACAVDIDGDGILNERDNCQYVYNVDQIDSDLDGVGDQCDNCPMAHNPD QMDSDSDRVGDKCDDNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGI PDDRDNCRLVPNRDQVDSDGDGRGDACKDDFDNDNVNDIDDVCPENVHISETDFRRFQMI PLDPKGTSQIDPNWIVRHKGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERDDDYA GFVFGYQSSSRFYVVMWKQVTQTYWESQPTKAQGYSGLSIKVVNSTTGPGMHLRNALWHT GNTVGQVKTLWHDPRQIGWKDFTAYRWRLTHRPKTGFIRVVMFEGKKIMADSGPLYDKTY AGGRLGLFVFSQEMTFFSDLKYECKDQ NT seq 3504 nt NT seq  +upstreamnt  +downstreamnt atggagctatccggcggtctctttctcctcctgatgcttggagtctccacaacaaaccgg attccagagactagtgacgataacagtgtttacgatttctttgagttaattggctttggc cgcaagggagcccacaaaggactgggggtgcattcgatcaaaggactagagacttccagc cctgcctaccgcatagatgatgccaaccgtatccctgcggtttctgatcacaagtttcaa gacattctttattccatccaagccgagaagggcttcatcttgttagctaatcttcgtcca ataaagaaggatgccggcaccatactggccgtggagcgcaaggataattctggctacgtt tttaagttggtgctaaatggcaaggcaaaaactttggacctgagtgtctttcccgatgaa ggtaaccaaagtttggtgtcagtggaggacgtgaagttgcccattgcgcgatggagtagc atcaccctctttgtacaagaggatcaggctcaactctatgtgggctgtgaaaaaatgacc aatgttgagctggaaattcctattcaagacatcttcactcgggatctgtccaacagagcc agactccgtattgctaaaggaggagttaatgacaacttccagggaatgctgcagaatgta cggtttgtgtttggaacttcactggaaaccatcctgaggaataaaggctgtcagatctct actggaacacttattaaattagacaatcccatgaatggctccagtccagccattcgtacc aactacattggccagaaaactaaggacatctgtggcttttcttgtgacgatctaaccaaa atgtttctagaactgcaaagcctgcgtgccctggttataaaagttcaggactctgtcaac catatggaacttatcgccccaccttatataaagaaaggaatatgcctccacaataatgtt gtgtatgaaaatgcagctgaatggaccactgacacctgtaccacatgtacctgccagaat tctgctgtaatgtgccataaagtgtcttgtcctctcatgccttgttccaatgccacagtt cctgatggtgaatgctgcccacgatgttggccaagcgattccgcagatgatgcttggtct ccctggtctgaatggaccacttgctctacaacctgtggcaatgggattcagcagagaggg cgttcttgtgacagaatcaaccatctttgtgaaggctcctcagtgcaaacacggatatgt aacatgcaagaatgtgataagagattcagacagaatggtggctggagccattggtcccct tggtcttcctgctctgttacttgtggaactgggttaatcactcgaatccgtctgtgcaat tctccacttcctcagatgggaggcaaaacgtgtgaaggagaggcacgcgaaaacatgcct tgccagaaaagcccatgcccaattaatgggaactggggaccatggtcaccttgggatgcc tgtccaattacgtgtggaggaggcattcagaaacgcagccgtctctgcaataatccagag ccccaatttgaagggaaggattgcattggtgatgcaacagccactcagatgtgcaacaag caggattgcccaatcgatggatgtctgtctaatccttgttttgcgggaactaaatgcact agtttccttgatggttcctggaaatgtggtccgtgccctgctggctatcaaggaaatgga attagatgcaaagatatcgatgaatgccaagaggtcccagatacgtgctttgtacttagt ggagtacacagatgtgagaatactgtacctggttatcactgccagccttgtccctcccgc ttcacaggaacacagccctttggtcagggcgtggaagatgcaatggcaaacaaacaggaa tgcaagccacgtaatccatgtgctgatggaactcacacctgcaacaaatatgccaagtgc atctaccttggacacttcagtgacccgatgtaccgctgtgaatgtaaaccaggatatgcc ggcaatgggattatctgtggagaagacactgatttagatggatggccaaatgaggatctt cactgtgttgccaatgctacttaccactgcactaaagataattgccctaaccttcccaat tctggacaagaagattatgatgatgatggaattggtgatgcctgtgatgatgatgatgac aatgacaacattcctgatgatagggataactgtccattcaattacaatccacaacagtat gactatgatagggatgatgttggtgatcgttgtgataattgcccatacaatcacaatcct cttcagatagacacagaccaaaatggagaaggcgatgcctgtgctgtggatattgatgga gatggcattcttaatgaaagagacaactgccaatatgtgtacaatgtggatcaaatagac tcagacttggatggagttggagatcagtgtgacaactgtccaatggcgcataatccagac cagatggattcagattccgatcgcgtaggggataagtgtgatgacaaccaggatattgat gaagatggccaccagaataatctcgataactgtccttatgtgcccaatgcaaaccaagct gaccatgacaaagatgggaaaggggatgcctgtgatcatgatgatgacaatgatggtatt cctgatgacagagataattgcagattggttcccaaccgcgaccaagttgattcagatggt gatgggcggggagatgcatgcaaagatgattttgacaatgataacgttaatgacattgat gacgtctgccctgagaatgttcacataagtgagacagacttccgtcgattccagatgatt cccttggatccaaagggaacatctcaaattgatcccaactggattgttcgtcataaaggc aaagaactggttcagactgtcaactgtgatcctggacttgctattggttttgatgaattt aatgctgttgacttcagtggtactttcttcattaacacggaaagagatgatgactatgct ggctttgtatttgggtatcaatccagcagccgtttttatgtggtcatgtggaagcaggtt acccaaacatattgggaatcacagccaaccaaagctcaaggatattcgggtctttctatc aaagtagtaaactctaccacaggtcctggaatgcaccttcgtaatgccttgtggcatact ggaaatactgttggacaggtaaagactctgtggcatgaccctcgtcagataggttggaaa gatttcactgcttatagatggcgtctcactcacaggccaaaaactggcttcattagagtg gtaatgtttgaaggaaagaagatcatggctgactctggccctctctatgacaaaacctat gctggtggtcgcttaggactgtttgtcttctctcaggaaatgacattcttctctgatcta aaatatgagtgtaaagatcaatga

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