Pantherophis guttatus (corn snake): 117677541
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Entry
117677541 CDS
T07329
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03272
Virion - Hepatitis viruses
pgut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117677541 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117677541 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgut04131
]
117677541 (LDLR)
Membrane trafficking [BR:
pgut04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117677541 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
EGF_3
EGF
hEGF
Psg1
NBP1
Motif
Other DBs
NCBI-GeneID:
117677541
NCBI-ProteinID:
XP_034293689
UniProt:
A0A6P9DEH1
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MSPGGLEISLFALMLLGILSRVSTNEQGKCGRNEFQCRNGDCIPYKWICDGNPECKDGSD
ESLDACKSVTCSSTQFSCGGRINRCIDMSWRCDLEVDCENGSDEDNCPPKRCADNQFQCQ
NGNCIAFDFVCDEDDDCGDSSDELDCRAPTCNPEMFHCNSSECIPKLWACDNDADCKDGS
DESPEFCGIQQGAKKTNPCSSLEFHCGSGECIHQRWQCDGSFDCKDRSDEANCVKATCRP
DEFQCNDGMCIHGSLQCNKEPDCKDLSDEVGCVNVTTCKGSNVFKCSSGECISMDKVCNG
LKDCRDWSDEPLKECRTNECLANKGGCSHICNDHKIGYECLCPEGFQLIDQRKCEDIDEC
LNPDACSQVCVNLKGSYKCECKEGYQFDPSTKACKAIGTIAYLFFTNRHEVRKMTLDHSE
YTNLIPHLKEAMALDMEISNNKIYWSDNFHKKIFSTPIDKASNHSHHTTVISSGIKVPDG
LAVDWVHHNIYWTDSGLGTISVASSEGLKRKTLIKEVGAKPRAIVVDPVHGFMYWTDWGM
SAKIAKSGLNGVDSFPLVKEGIQWPNGITLDLITHRLYWVDSKYHSVSSIDVNGGNRRTI
LVDEEMLAHPFGIAVFEDKVFWTDVLNEAIFSANRRTGSNIVKVADNLFSPEDLTLFHSV
RQPKGTNWCEKNGIPNGGCQYLCLPAPQINFHSAKYTCVCPDGMHLDTDMRSCTQDPVTP
DTPTEAATTVHSAKISPTARLLSTSKTPTQKTSHLPADVLNKVVTNIPEHTTHEMVTLSQ
QVRNGIAAETDGTERRGPSALAIVLPLALISLVSFGIFLIWKNWRLKNINSINFDNPVYQ
KTTEDEIHICRSQEGYTYPSRQMVSLEDDAA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcccaggtggattggaaatttcattgtttgccttgatgctgttgggtatcctcagc
cgagtctccacaaatgagcagggcaagtgtggaagaaatgaatttcagtgcagaaatgga
gattgcatcccttacaaatggatctgcgatgggaaccctgaatgcaaggatggttctgat
gaatccctggatgcatgcaaatctgtgacttgcagttcaacccagttcagctgtggcggc
cgcatcaatcgttgtattgatatgtcctggcggtgtgacttggaagtggattgtgaaaat
ggttcagatgaagacaactgccctcctaaacgttgtgcagataatcaattccaatgccaa
aatgggaattgtattgcttttgattttgtctgtgatgaagatgatgactgtggagatagc
agtgatgaattagactgtcgtgccccaacctgcaatcctgaaatgtttcattgcaacagc
tcagagtgcattcccaagctctgggcctgcgacaatgacgcagactgtaaagatggatct
gatgaatcacccgagttctgtgggatccagcagggagccaagaaaaccaatccatgctct
tcgttggagtttcattgtgggagtggcgagtgcatccaccagcgctggcagtgtgatgga
agctttgactgtaaggacagatcagatgaggcaaactgtgttaaagcaacctgccgccct
gatgaatttcagtgcaatgatgggatgtgcatccatgggagcttgcagtgcaacaaagag
cctgactgcaaagacctgagtgatgaggtcggctgtgtcaatgtgacaacttgcaaggga
tcaaatgtatttaagtgcagttctggagaatgtatcagcatggacaaggtctgcaatgga
ttgaaagactgcagggattggtcagacgaacctcttaaagagtgccgaactaatgaatgt
ttggctaataagggaggttgttctcatatatgcaatgaccacaaaattggatatgaatgt
ttgtgccctgaaggcttccagctgattgatcaaagaaaatgcgaagatattgatgagtgt
ctcaaccctgatgcctgtagtcaagtctgtgtgaacctgaaaggaagctataaatgcgaa
tgtaaagaaggatatcagtttgatccatccaccaaggcttgcaaagcaattggcaccatt
gcttacctcttttttaccaatcgccatgaggtcaggaaaatgacattagaccacagcgag
tacacaaatctgatcccccatcttaaagaagcaatggccttagatatggaaatcagcaac
aataaaatctactggtctgacaactttcacaagaaaatattcagtaccccaattgataag
gctagcaatcattcccaccataccactgtgattagcagtggcatcaaggttccagatggc
ctcgctgttgactgggtgcatcacaatatttactggactgactctggcctaggcaccatc
tctgtggccagcagtgaaggcttgaagaggaagactctgatcaaggaggtcggtgccaaa
ccacgtgccattgtggtggatccagtccatgggttcatgtactggactgactgggggatg
tctgctaaaattgccaaaagtggtctgaatggagtggacagtttccccttggtgaaagaa
ggcattcagtggcctaatggaataacattagatctgattacccatcgcctttattgggta
gactccaaatatcactcagtctctagtattgatgtgaatgggggaaacagaagaactatc
cttgtggatgaagagatgttggctcacccttttggcattgcagtctttgaggataaagta
ttctggacagatgtcttaaatgaagccatctttagtgccaaccgtcgaaccggttcaaat
attgtgaaagtggcagacaatctcttttcaccagaggatttgacactatttcattctgtg
cggcaaccaaaaggtacaaattggtgtgagaagaatggcatccccaatggaggctgccag
tacctttgccttcccgctccccaaatcaatttccactctgccaagtacacctgtgtctgt
cctgatggcatgcacctggacactgacatgagaagctgcacccaagatcctgttacacct
gatactccaactgaggctgctacaacagtgcactctgctaagatttcacctacagcacgg
ctactatctacaagtaagactccaacccagaaaaccagtcatctgcctgcagatgtgctg
aataaagttgttaccaacatcccagaacataccactcatgagatggtcaccctgtcccag
caagttcgaaatggcattgctgcagaaacagatgggacagaacggaggggtccatcagca
ctcgctattgttctacctctggcactgattagtttagtctcctttgggatttttctcatt
tggaagaattggcgtctcaagaacatcaacagtatcaattttgataaccccgtttatcag
aagacaactgaggatgaaattcatatctgtcggagccaggaaggatatacatacccatcg
agacagatggtcagtctagaagatgatgcagcatga
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