Pterocles gutturalis (yellow-throated sandgrouse): 104469262
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Entry
104469262 CDS
T08540
Symbol
DDX58
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu04622
RIG-I-like receptor signaling pathway
pguu04623
Cytosolic DNA-sensing pathway
pguu05164
Influenza A
pguu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104469262 (DDX58)
04623 Cytosolic DNA-sensing pathway
104469262 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104469262 (DDX58)
05168 Herpes simplex virus 1 infection
104469262 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pguu04054
]
104469262 (DDX58)
Enzymes [BR:
pguu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104469262 (DDX58)
Pattern recognition receptors [BR:
pguu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104469262 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104469262
NCBI-ProteinID:
XP_010082011
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MGDVVTQLWQYEENISLQTCISAVEKLSETTSETLARELQHLREGSGKTFVALLICEHHP
QNIPAGXKDEVVFLATKVSVYEQEKTVFKQHFEXSGYSVQXISDETGANVSVEKVIXDSD
IIVLTPQILVNSIEEGILSNLSIFTLMIFDECHNTTGNHSYNVLLTTYXVQKFDSFANQL
PQIVRLTASVGVNAKNTKETTEHICTLCSYLDILAISTLRENKQDLQRFRKKPETYVRWV
KMRAQNYFADIIPDLMSETEVLMRKIYSLGKILXHILISQINKNGFGTQKYEHXIVATQK
KCRLLQLADKEKESSICRDLFTCIEHLRKFYDPLIISEDAHIEDALSYLKEFFTNVKNGP
HTEXEKQLTVTFQEKEPELTALSKDXSNQNAKLXELSCILDEAHCYNPQTCTLLFAKTKA
LVAALKKWIEANPLLSHIKPDVLMGRGRRDQKTDTQFLGTVGMNLPLQKSGCIQNNKDSS
LLITTYVADEGIDISECNLVVLCEYFGNVTKMIQVRGRGRARDSKCILVTSKTEMVENEK
HNCFKEEMMNEGLEKLQNWDETTFARKESHHTVLGDAFKECYITKPHQKLVQFNCFEKKS
KMHCQNTNCQHDWGITVKYKTFNDLPVIKIKSVVVENMETGTQMDFHKWKTTYFSLKNFD
VEETSS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgtggttacccaactctggcaatatgaagaaaacatctccttacagacctgc
atctcagctgtggagaagctgtctgagacaacgtctgagaccctggcccgggagctccag
catttgagagaaggatctggaaaaacttttgtggcacttctgatttgtgaacaccatcct
caaaacatccctgcaggantgaaagacgaagttgtctttcttgcaactaaagtgtcagtg
tatgaacaagagaaaactgtattcaagcagcattttgaatgaagtggatattctgttcaa
tgaattagtgatgaaacaggtgcaaatgtctctgtagaaaaggttatataggacagtgac
atcatcgtgctgacgccccagattcttgtgaatagcatcgaggaggggatccttagcaac
ctctccatcttcactctgatgatatttgatgagtgccacaacactacaggcaaccactct
tacaatgtgttactgaccacgtacncggtacaaaaatttgactcctttgcaaaccagcta
cctcagattgtacgtttaactgcttctgttggagttaacgccaagaacaccaaggaaaca
acagagcacatctgtactctctgctcctaccttgacatactggccatatccactctcaga
gagaacaaacaggatctgcagagattcagaaagaagccggaaacatatgtcagatgggtt
aaaatgcgagctcagaattactttgcagacattatcccagatctgatgtctgagacagag
gtgctgatgaggaaaatttactccctgggtaagatactgtaacatatacttatctctcaa
atcaacaagaatggttttggaacacagaaatatgaacactagatagttgccactcagaag
aaatgcagacttttgcaattggcagataaggagaaggagagcagcatttgtagagacctt
ttcacttgtattgaacacttgcggaaattctatgatcctctcatcatcagtgaggatgct
cacattgaggatgctttatcctacctaaaggaatttttcacaaatgtcaaaaatggacca
catacagaatgagagaagcaactgacagttacatttcaagagaaagaaccagaactgact
gctctttcaaaagactaatctaatcagaatgccaagctgtaagagctttcttgcatcctg
gatgaagcacactgctataacccacagacttgcactcttctctttgctaagacaaaagcc
ttagtagctgctttgaagaagtggatagaagcaaaccccctacttagccacataaagcca
gatgtgttgatgggtcgtggaagaagagaccaaaaaacagatacgcagtttcttggtact
gtaggtatgaacctcccactgcagaagagtggatgcattcaaaacaacaaagacagcagc
ctgctaatcactacatatgttgctgacgaaggcattgatatttctgagtgcaaccttgtt
gtgctctgtgaatacttcggtaatgtcaccaaaatgatccaagtcagaggtcgtggaagg
gcaagagatagcaagtgcatccttgtgacaagcaaaacagaaatggttgagaacgagaaa
cacaactgttttaaggaagaaatgatgaatgaaggacttgaaaagctacagaattgggat
gaaacaacatttgcaagaaaggaatctcatcacactgtcctaggagatgcgttcaaggag
tgttatataacaaagcctcaccagaaactagtccagtttaactgttttgagaaaaaaagc
aagatgcattgccaaaatactaattgccagcatgactggggaatcacagtgaagtacaag
acattcaatgatctaccagtgatcaaaatcaaaagtgttgtagtagagaacatggaaacc
gggacacaaatggattttcataaatggaaaactacttatttttctttgaagaattttgat
gttgaagaaacgtccagttga
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