Pterocles gutturalis (yellow-throated sandgrouse): 104471856
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Entry
104471856 CDS
T08540
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pguu03036
]
104471856 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
pguu03400
]
104471856 (SMCHD1)
Chromosome and associated proteins [BR:
pguu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104471856 (SMCHD1)
DNA repair and recombination proteins [BR:
pguu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104471856 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
Big_1
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104471856
NCBI-ProteinID:
XP_010085650
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MLLSATKERIDFLPHYDTLVKSGMYEYYASEGQNPLPFALAELVDNSLSATSRNTGIRSI
QIKLLFDDSQGKPAVAVLDNGRGMTSKQLNNWAVYRLSKFIRQDDFESDHSGYVRPLPVP
RSLNSDISYFGVGGKQAVFFVGQSARMISKPAESQDVHELVLSKEEFEKKEKNKEAIYSG
YIRNRKPSDSSHVTSDDERFLHNLILEERDKESFTAVVITGVQAHHMQYLKNFFHLWTRQ
LAHIYHYYIHGPKGNEANAVTKDLSPFNNIDIQISMFEKGKAPKIVNLREIKDDMQTLYI
NTAADSFEFKAHLDGDGIVEGIIRYHPFLYDKETYPDDPSFPSKLKDDDDDDDDCFVVEK
SARGKRPIFECFWNGRLIPYTTVEDFDWCAPPKKRGLAPIECYNRISGALFTNDKFQVST
NKLTFMDLELKLKDKNTLFTRIFNGQEQRMKIDREFALWLKDCHEKYDKQIKFTVFKGIT
TRTDLPSKRMQSPWAIYAAIEWDGKTYKTGQLVKTVKTLPIFYGSIEKFFLYGDHDGDIF
ATGGEVQIALEPQALYGEMKTIPISKLDRTVSDKAVKKYIEDEMARLPDKLSVTWPEGDE
LLPNETRFAGTPIGALRIEILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSPTGNKEII
SHISQHGGKWPYWFKKMENLQKIGNYTLKLQVVLNESNADTYAGRPLPSKIFKFTIIEGK
PEKFSVGLLELPFQVGVPFNIPLELQDEFGHATQLTTDVKPILEASGLTLQYERITTGAK
CIIKGVTARGCISSCQGKNFNLKVTLPGLKEDTQICKIRLQPGPPHQLKVKPDSEVLKIE
NGTAFPFQVEVLDESGNVTAQPKLIVHCKFVGASDLPVYSADCSNGGTNILTGPVIHVQN
IKKDQILKARIEILSCKDVPPVEKIIKLLPSSRVARLQILSMDGQKAIQIKHQDEINWVA
GDVMRNLVFQMYDEGDREIHITPAVAEKIKVNWTPKINREQLIQGLLPDVKVPTSVKDVR
YCLITYLDDHVSLESAFTVRPLPDEPKHIKCKLKGPNTLQMGEELQSEIDVMITDQYGNQ
VQTVTSACVNSLGVSGPGLDKSALKITWQESTLTMRVKGVRFKPCLLGSKELCFAWREFS
DFLRVNLIAGSPAKLQFVDWPEFEKPVAVINGRELQKPLIVQLCDQWGNPSPEPNVKISL
TKSNNLKIVPSNQQHKTDENGRANLGVVSICAPRGEHTLQLKAVYNKTTLDCPIVTLNVL
PDPEKPVRLNVKYDKNASFPAGGTFPDFMVSVLSEDDSIIKNINPARISMNMWEAQSGRT
SIPIDVTTFSCSKVKDDKEDGFFYFRDKVVPERVGTYSIQFTFAMDKTYTLRSDQIIVEV
VPNDPVRLLPDWLPATPAVSNVRTLTSRTLVKDLYLHVMDAYNNHTGIDLFGKIIAKIKS
PNEDDDIEIPQFQGKVSTVEFPLDRGSAEIVSMPKIPS
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttcagcaaccaaggagcgaattgacttcctaccccactatgatacacttgtc
aaaagtggcatgtacgagtactatgccagtgaagggcaaaatcctttgccatttgccctt
gctgagttggttgacaattctctgtcagctacatcccgaaatacaggtattcggagcata
cagataaaattgttatttgatgactcccaaggaaaaccagctgttgctgtgctcgataat
ggaagaggaatgacttctaaacagcttaacaactgggctgtgtatagattgtcaaagttt
ataagacaagatgacttcgagagtgatcattcaggatatgtacgccctttgccagtgcct
cgtagcttaaatagtgatatctcatattttggagttggaggcaaacaagcagtgttcttc
gttggacagtctgccagaatgataagcaaacctgcagaatctcaggatgttcatgagctt
gtcctttctaaagaggagtttgaaaagaaggagaaaaacaaagaagcaatatatagcgga
tacattcgaaacagaaagccctctgactcttctcacgtcacaagtgatgatgaaagattt
cttcataacctaatattagaagaaagggataaagagagtttcacagcagttgtcattaca
ggtgtacaagcacatcatatgcagtacttgaaaaacttctttcatctgtggacaaggcag
ctggcacatatctatcactattatatccatggaccaaaaggaaatgaagctaatgctgta
acaaaagatctaagccctttcaacaacatcgacattcagatttcaatgttcgaaaaagga
aaagcaccaaagattgtcaatcttagggagatcaaagatgacatgcagacattgtatata
aatactgcagcagatagttttgagtttaaggcacatcttgatggagacggtatagtggaa
ggcatcattcgatatcatcccttcctgtatgataaagaaacataccctgatgatccatct
tttccatcaaaattaaaggatgatgatgatgatgatgatgactgctttgtagtagaaaag
agtgccagaggaaaaaggcctatttttgaatgtttttggaatggaagattaataccgtac
acaactgtggaggattttgactggtgtgctcctcccaagaagagaggattggcaccaatt
gaatgctacaacagaatttctggtgcgttatttaccaatgataagttccaggtcagcaca
aacaagctcactttcatggatctggagctgaaactaaaagataagaatactctgttcaca
agaatcttcaatggacaggagcagcgaatgaaaattgacagagaatttgctttgtggctc
aaggactgtcatgaaaaatacgacaaacaaataaaattcacagtctttaaaggaataact
acacgtactgatttaccatccaaaagaatgcagagcccttgggcaatatatgctgcaata
gagtgggatgggaaaacatacaaaactggacagctggtgaaaactgttaagactcttcca
atattctatggaagtattgagaaattttttttgtatggagaccatgatggagatatattt
gccactggaggagaggttcagattgctttggaacctcaggcattgtatggtgaaatgaaa
actattccaatctcaaaacttgacagaacagtgtctgacaaagctgttaaaaaatacata
gaggatgaaatggcaagacttcctgacaaactgtcagtaacgtggcctgaaggagatgag
ttattaccaaatgaaacaagatttgcgggtacaccaataggagcattaagaatagaaatt
ttgaataaaaaaggagaagcaatgcagaaacttccaggtacaagccacggaggttcaaag
aaacttcttgttgaactcaaggttattttacattcgcctactgggaataaagaaataatt
tcccatatcagtcagcatggaggcaaatggccatactggtttaaaaaaatggaaaatctt
cagaaaattgggaactataccttgaaactacaagtagtgttgaatgaaagtaatgcagac
acttatgcaggaaggcctctaccatctaaaatatttaaatttactattatagagggcaaa
ccagagaaattttcagtgggtcttttggagcttccttttcaagttggagtaccttttaat
attcctttggaactacaggatgaatttggtcatgcaacacagttgacaactgatgttaaa
ccaattcttgaagctagtggattgacattgcagtatgaaagaataacaacaggagcaaag
tgcatcattaagggtgttactgctagaggctgtataagtagttgccaaggcaagaacttt
aatctgaaggttactcttcctggtttgaaagaagacacacaaatctgtaaaataagattg
cagcctggccctcctcaccaattgaaagtaaaaccagattctgaagttctaaagattgaa
aatggtacagctttcccctttcaggttgaagtattggatgaatcaggaaatgtaacagca
cagccaaagttgatagttcattgtaagtttgtaggtgcttcagatcttcctgtgtattct
gcggactgcagtaatggaggaacaaatattttaactggtccagttatacatgtgcagaat
ataaagaaagaccagatactgaaagcaaggattgaaatacttagttgtaaagatgtgcca
ccagtggaaaagattattaaacttcttcctagcagtcgtgttgcaagactacagatctta
agtatggatggacaaaaagctattcaaattaaacatcaggatgaaattaattgggttgct
ggcgatgtgatgcgcaaccttgtatttcagatgtatgatgaaggagacagggagatacac
ataactccagctgtggcagaaaaaatcaaggttaactggacacctaaaattaacagggaa
cagttgattcagggattattacctgatgtaaaagtaccaacatcagtaaaagatgtacgc
tactgtctgattacttatcttgatgaccatgtgtctttggagagtgcattcacagtcaga
ccacttcctgatgaacccaaacacattaaatgtaaattaaaaggaccaaacacactgcag
atgggtgaagaactacaaagtgaaattgatgtaatgattacagatcagtatggaaatcag
gttcagacagtgacatctgcatgtgtcaattccctaggagtttctgggcctggacttgat
aaatcagctttgaaaataacttggcaggaaagtactctaaccatgagagtaaaaggtgtt
cggtttaaaccttgtttacttggaagcaaagaattgtgcttcgcttggcgtgaattttct
gactttctcagagtaaatttaattgcaggatcccctgctaaattgcagtttgtggactgg
ccagagtttgaaaagcctgttgcagtgattaatggtagagaattgcagaagcctcttatt
gttcagctgtgtgatcagtggggaaatccatctcctgaacctaatgtcaaaatcagcctt
acaaagagtaacaacttaaagattgttccttcaaaccagcaacataaaacagatgaaaat
ggtagggctaacctgggagttgttagtatttgtgcacctagaggagagcacactttacag
cttaaagctgtatacaacaagaccacattagattgtcctatagtcacgttaaatgtcctg
cctgatcccgagaaacctgtccgcttgaatgttaaatatgacaaaaatgcttcttttcca
gcaggaggtaccttccctgattttatggttagtgttctttctgaagatgacagcattatt
aaaaatattaatccagcacggatttctatgaatatgtgggaagcacagagcggcagaact
agcataccaattgatgttacaacatttagctgtagtaaagtgaaggatgacaaggaagat
ggcttcttctacttcagggataaagtggttccagaaagagtgggcacttacagtatccag
tttacctttgcaatggataagacatatacactcaggagtgaccagattatagttgaagtt
gtacctaatgaccctgtacggttgttacctgattggttaccagctactccagcagtttcc
aatgttcgaactcttactagccgtacgctggtcaaggatttatacctccatgtaatggat
gcatacaacaaccacactggaattgatctatttggcaaaataatagcgaaaattaagagc
cccaatgaagatgatgatatagagatcccacagtttcagggaaaagtcagtacagttgag
tttccacttgacagaggatcagctgaaattgtaagcatgcccaaaatacccagttag
DBGET
integrated database retrieval system
