Polymorphum gilvum: SL003B_4234
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Entry
SL003B_4234 CDS
T01458
Symbol
mdh
Name
(GenBank) Malate dehydrogenase 1
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00020
Citrate cycle (TCA cycle)
pgv00270
Cysteine and methionine metabolism
pgv00620
Pyruvate metabolism
pgv00630
Glyoxylate and dicarboxylate metabolism
pgv00680
Methane metabolism
pgv00710
Carbon fixation by Calvin cycle
pgv00720
Other carbon fixation pathways
pgv01100
Metabolic pathways
pgv01110
Biosynthesis of secondary metabolites
pgv01120
Microbial metabolism in diverse environments
pgv01200
Carbon metabolism
Module
pgv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SL003B_4234 (mdh)
00620 Pyruvate metabolism
SL003B_4234 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
SL003B_4234 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SL003B_4234 (mdh)
00720 Other carbon fixation pathways
SL003B_4234 (mdh)
00680 Methane metabolism
SL003B_4234 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SL003B_4234 (mdh)
Enzymes [BR:
pgv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SL003B_4234 (mdh)
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GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ADZ72651
UniProt:
F2IVD3
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All DBs
Position
complement(4544846..4545808)
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AA seq
320 aa
AA seq
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MARNKIALIGSGQIGGTLAHLAGLKELGDIVLFDIAEGVPQGKALDIAESSPVDGFDAKL
AGANSYEAIEGADVVIVTAGVPRKPGMSRDDLLEINLKVMEQVGAGIAKYAPNAFVICIT
NPLDAMVWALQKFSKLPASKVVGMAGVLDSARFRYFIADEFNVSVEDVTAFVLGGHGDTM
VPLTRYSTVAGIPLTDLVKMGWCTAERLEQIVQRTRDGGAEIVGLLKTGSAFYAPASSAI
AMAESYLKDKKRVLPCAAALDGQYGLKDTYVGVPVVIGAGGVERIIEIDMNADEKAMFDK
SVASVDGLVEACKKIQPALA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaacaagattgctttgatcggctctgggcagatcggcggaacgctcgctcat
cttgccggtctcaaggaactcggggacattgtccttttcgacatcgccgagggcgtgccg
cagggcaaggcgctcgacatcgccgaatcctcccccgtcgacggcttcgatgccaagctt
gccggcgccaacagctatgaggccatcgagggcgccgacgtcgtcatcgtcaccgcgggc
gtgccgcgcaagccgggcatgagccgcgacgacctgctcgagatcaatctcaaggtgatg
gaacaggtcggcgccggcatcgccaagtatgccccgaacgccttcgtcatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcagaagttctccaagctgcccgccagcaag
gtcgtcggcatggccggcgtgctcgacagcgcccgcttccgctatttcatcgccgacgag
ttcaacgtttcggtcgaggacgttaccgccttcgtgctcggcggccacggcgacacgatg
gtgccgctgacccgctactccacggttgccggcatcccgctcaccgacctggtcaagatg
ggctggtgcacggccgagcgcctggaacagatcgtccagcgcacccgtgacggcggcgcc
gagatcgtcggcctgctcaagaccggctcggccttctacgcgccggcctcctcggccatc
gccatggccgaatcctacctgaaggacaagaagcgcgtgctgccctgtgccgctgccctc
gacggccagtacggccttaaggacacctacgtcggcgtgccggtggtgatcggcgccggc
ggcgtcgagcgcatcatcgagatcgacatgaacgccgatgagaaggccatgttcgacaag
tccgtcgcctcggtcgacggtctggtcgaggcctgcaagaagatccagccggcgctcgcc
tga
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