Pectinophora gossypiella (pink bollworm): 126367913
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Entry
126367913 CDS
T09293
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126367913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126367913
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126367913
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
126367913
NCBI-ProteinID:
XP_049867672
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Position
6:complement(8912949..8922958)
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AA seq
410 aa
AA seq
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MSFEYLPVAEDENEEPIELPIEEDGTLMLTTVSAQFPGCCGLKYRHPETKNIRGIRLRDG
RLYPPPEGWGNHLYICSFPKENKRKSGENSETSSVKNKRNDNLCSDLIVLGLPWKATEQT
VREYFEKFGEVLMAQLKRDPKTGMSKGFAFIRFASYTSQMRVLAQRHMIDGRWCDVRIPN
SKEGSVTSMPCKVFVGRCTEELSANDLREYFSQFGEVTDVFIPKPFRAFSFITFLDPEVA
QSLCGQDHIIKGVSVNVSNASPKQNKSGSNQRNLPARSYDDGHAHNASNNNSWSSRNMDM
VNMQALGMSSQHGQTPVAGGGGQGQGGSMPLGMGGLPVNQALVAAALNQAGWGLINNIQS
GGSEQGAFAGPASSAPPAPPNFLSWMQQGNSAQGPSSQWGQRHQSQGHSV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgaatacttgcccgtggccgaagacgaaaatgaggaacctatagaattacca
atcgaagaagatggaacgttgatgctgacaacagtatctgcgcagtttcccggctgctgt
ggcctcaaatatcgccaccccgaaacgaaaaacatccggggcataaggttaagagatggc
aggttgtaccctcccccggaaggatggggtaatcacttgtatatatgcagctttcctaaa
gaaaataaacgtaaatccggtgaaaactctgagacttcttctgttaagaacaaaagaaat
gataacctgtgctcggatcttatagtgctgggcctgccatggaaggcgacggagcaaact
gtgcgtgaatactttgaaaaatttggagaagttctgatggcacagctgaagagggaccct
aaaactggtatgtcgaaaggtttcgctttcattagattcgcgtcttacacgtcacagatg
agagtgttagcccagaggcacatgattgatggccgctggtgtgacgtgcgaatacctaac
tctaaagaaggctctgttacatctatgccttgtaaagtatttgttgggcgctgcactgag
gaattatcagctaatgatttaagagaatatttttctcagtttggagaagtgacagatgtg
tttattccaaaaccatttagagcctttagttttataacatttttggacccagaagtagca
caaagtctatgtggtcaagatcatataataaagggtgtatctgtcaatgtatcaaatgca
tcaccaaagcaaaataagagtggttcaaatcaacgaaacttgcctgctaggagctatgat
gatgggcatgcacataatgcatcaaacaataattcttggagcagtcgtaatatggatatg
gtaaacatgcaagctttgggtatgtctagccaacatgggcagactccagttgctggagga
ggaggacaaggtcagggtggcagcatgccacttggcatgggagggttaccagtaaaccaa
gcactagtagcagctgcactaaatcaagctggctggggtcttataaacaacatacagtct
ggtggctccgaacaaggtgccttcgcaggtcccgcatcttcagcacctccagctccgccc
aacttcctctcctggatgcaacaaggtaactcagctcagggaccgtctagtcagtgggga
caacggcaccagtcccaaggccactctgtttga
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