Pectinophora gossypiella (pink bollworm): 126372713
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Entry
126372713 CDS
T09293
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126372713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126372713
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126372713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
126372713
NCBI-ProteinID:
XP_049874519
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All DBs
Position
14:complement(16146855..16148084)
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AA seq
310 aa
AA seq
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MSGEYALVSESEHDEPIELPCEEDGSLLLSTLAAQFAGASGLKYRCGGRLRGLRLTDGAL
RPPPDGWAAHRYFCAFPRRSPPLSPTPRPRPSDLIVLGLPWRTSEDAVRDYFASFGELLM
VQVKRDARTGLSKGFGFIKFAEHEAQVRALSRRHMIDGRWCDVRIPNSKEAGAAQRKVFV
GRCTEALTADDLREYFAAFGQVTDVFVPKPFRAFSFVTFLDPEVAQSLCGQDHIIKGVSV
NISTASPKRAGAASAGGAGPGGGGSGGRWGLERGARLLGWAACGDWGLPQQQPHAPLAHA
PQDKPYLKYE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgagtatgcgctcgtgagcgagagcgagcacgacgagcccatcgagctgccg
tgcgaggaggacggttcgctgctgcttagcacactcgccgcgcagttcgcgggcgccagc
gggctgaagtaccgctgcggcgggcggctccgcggattgcggctgacggacggcgcgctg
cggccgccgccggacggctgggcggcgcaccgctacttctgcgctttcccgcggcgctcg
ccgcccttgtcgccgacgccgcggccgcgcccttccgacctcatcgtgctcggcctgccg
tggcgcaccagcgaggatgccgtgcgggactacttcgcctcgttcggcgagctgctgatg
gtgcaggtgaagcgggacgcgcgcaccggtctctcgaagggtttcggcttcatcaagttt
gccgaacacgaggctcaggtgcgcgcgctgagccgccggcacatgatagacgggcgctgg
tgcgatgtacgcatccccaacagcaaagaggcgggtgccgcgcagcgtaaggtgttcgtc
ggccgctgcacggaggcccttaccgcagacgacctgcgcgagtactttgcggcgttcgga
caggtgacggacgtgttcgtgcccaaacccttccgcgcgttcagtttcgtaacgttcctg
gatcccgaggtggcgcagtcactgtgcggacaggaccatattatcaagggcgtgtcggtg
aacatctcgacggcgtcgccgaagcgcgcgggcgcggcgagcgcgggcggcgccgggccg
ggcggtggcggcagcggcggccgctgggggctggagcgcggcgcgcggctgctgggctgg
gcggcgtgcggggactggggcctgccgcagcagcagccgcacgcgccgctcgcgcacgcg
cctcaagacaagccttatctcaagtacgagtga
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