Pectinophora gossypiella (pink bollworm): 126382011
Help
Entry
126382011 CDS
T09293
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126382011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126382011
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126382011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
PTP_N
Motif
Other DBs
NCBI-GeneID:
126382011
NCBI-ProteinID:
XP_049887651
LinkDB
All DBs
Position
3:10326136..10329012
Genome browser
AA seq
452 aa
AA seq
DB search
MNNKDFVMKNNEKNDNMDLFEYIRVSEDEDESNAVEIPCELDGTLLLSTLVAQFPGACGL
KYRHPETKSIRGIRLSDGRLHSPGEVGWGKYLYICVFPKENKRKMEDVSPENSAAKTKRL
EKKLACSDLICLGLPWKSTEESIRQYFEQFGEVVMVQLKRDKNGSFKGFGFIRFATYASQ
MRALAQRHNIDGRWVDVRIPNSKEGVVPQMPCKVFVGRCTEDMTADDLREYFSKFGEVTD
VFVPRPFRAFGFVTFLDPEVAQSLCGEDHVIKGASVSVSSAAPKIKSKPNHNWKEDSYGP
NWEANRSGPSSGSGNSGGSSNIDSLNMQNLGINPNGGPPANFNLPISLVAAALNQAGWGG
FLGGPNNSGPNWQGGPPQGNSGKNWNSNQNWSQNGPPPSWNQGGGSNQGWSSKGGGNWNQ
GNWSNGQQGQGSWGGNGSGPAGSGGWNNKSQT
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaagatttcgtaatgaaaaacaatgagaaaaatgataacatggatttattt
gaatatataagagttagcgaagacgaagatgaatctaatgccgtcgaaataccatgcgag
ttggatggcactctcctattgtcgacacttgtggctcagttcccaggggcttgcggtctc
aaatatcgtcaccccgagactaaatctattcgcggcattcgtcttagcgatggcaggctg
cattcacccggtgaagtcggttggggaaaatacctctatatttgcgtttttcctaaagaa
aacaagcgcaagatggaagatgtatcacctgaaaattcagctgcaaaaacgaagcgctta
gagaagaagcttgcatgttcagatctcatctgcctaggactaccgtggaagtcaacagag
gagtctatcaggcagtactttgaacaatttggagaagttgttatggttcagctaaagaga
gataaaaatgggtcattcaagggatttggtttcatccgttttgctacatatgcttcacaa
atgagagcactagcacagaggcacaacattgacggtcgctgggttgatgtacgcatccct
aattcaaaagaaggtgtagtaccacagatgccatgcaaagtgtttgttggaaggtgtact
gaagatatgactgctgatgacctcagggagtatttttctaagtttggggaagtaacagat
gtctttgtccctcgtccatttagggcatttggatttgttacttttctggatcctgaagta
gctcagagcttgtgtggagaagatcatgtaattaaaggagcttctgtatcagtttctagt
gctgcaccaaaaataaaaagtaaaccaaatcacaactggaaagaagattcttatggacct
aactgggaagcaaatagatcgggcccttctagcggttcaggaaacagtggtggaagcagt
aacattgactctctgaacatgcagaatttgggaatcaatccaaatggtggaccaccagct
aattttaatttgcctataagtcttgtagctgctgctctgaatcaggccggatggggagga
tttctaggaggacctaacaactctggccctaattggcaaggaggccctccacaaggtaac
tctggtaaaaattggaacagtaatcaaaactggagccaaaatggcccacctccatcatgg
aatcaggggggaggcagtaaccagggctggagcagtaaaggtggtggcaactggaatcaa
gggaattggtcaaatggacaacaagggcaaggcagctggggcgggaatggttctgggcca
gctggctctggcggatggaacaacaagtcacagacttga
DBGET
integrated database retrieval system
