Pectinophora gossypiella (pink bollworm): 126382207
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Entry
126382207 CDS
T09293
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126382207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126382207
Spliceosome [BR:
pgw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126382207
Complex C
U5 SnRNP specific factors
126382207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
TniB
Ras
Motif
Other DBs
NCBI-GeneID:
126382207
NCBI-ProteinID:
XP_049887935
LinkDB
All DBs
Position
3:complement(1424721..1447151)
Genome browser
AA seq
977 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSEDEQSVYGGDNRDADEDAMEEDEDADAEPEVAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPIKHKNFQVQEQQLPETKYDMEYLA
DMLDNTNLMRNVTLMGHLHNGKTSFVDCLMRQTHPGTINNETTIPMRYTDTLFVEQERGV
SIKGMPVTLLLKDIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTLCINKIDRLILELKLPPADAYYKLRHIIDELNSMLETNQPQDNPD
EPPIMFSPLLGNVCFASSLYDVCFTLESFAAMYAQAHPDSGLRAKDMSAWLWGDVYFNNK
TRRFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLQELGIRLTKQEARINV
RPLLRLVCSRFFGDFCGFVELVVRHVPSPLDAAPRKVAHTYRGASGPLYDDMITCDQSGR
LVAHTTKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSTQDEEDSRIMNVGRLWIY
EARYKVELNRVPAGCWALIEGIDQPIVKTCTLVAAEEDQELHTFKPLRFNTQAVVKIAVE
PVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQLMN
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatttgtatgatgagtttgggaactacattgggccggatttagagtcggat
tctgaagatgagcagagcgtgtacggtggggacaatcgggacgctgatgaggatgctatg
gaagaagatgaggacgcggacgcggagcccgaggtggcgcctatgtccgtcgtgctacat
gaggacaaaaggtactacccacaagcagtggaagtgtatggtccagatgtagaaaccgtg
gttcaggaggaagacacacaggctttggacaagccgttggtggagccgattaaacacaag
aactttcaagtgcaagaacagcagctaccagagaccaagtacgacatggagtaccttgct
gatatgctggataatacaaatttgatgaggaatgtcacactcatgggacatttgcataat
ggcaaaacatcatttgtggactgcctaatgcgtcagacccatcctggcacaataaacaat
gagacaacaatccctatgagatatacggacacattatttgtcgagcaagagcgcggagtc
tccatcaagggtatgccagtcactttgctgctcaaagacatcaagggaaagtctcacttg
ctgaacatcatggacaccccaggtcatgtcaactttagcgatgaggtcaccgctgctttg
aggatttctgatggcgcagtactattcgtggacgcggcagaaggcataatgctgaatact
gagcgtctactccgtcacgccgtccaagagagagtgcctctcacactctgcatcaataag
attgatcgtctaatccttgaattgaagctaccgccagcggacgcgtactacaaattgcga
cacatcattgatgagttgaattccatgttggagaccaaccagccgcaggataatcctgac
gaaccgcctattatgttctcgccgttgcttggtaacgtgtgcttcgcgtcatcactctac
gacgtgtgtttcaccctggagtcgttcgcggcgatgtacgcgcaggcgcaccccgactcc
ggcctccgggccaaggacatgtcggcctggctgtggggcgacgtgtacttcaacaacaag
accaggaggttcaccaagaagcaaccgcatgcttccgcccagaggagctttgtcgagttt
attttggagcccctctataagatctttgctcaggtggtaggtgacgtggatgacacccta
ccagcagttcttcaggagctgggcatccggctgactaaacaggaggctcgtatcaacgtg
cgcccgctgctgcgtctcgtgtgcagcaggttcttcggggacttctgcggctttgtggag
ctagtggtccgtcatgtcccgtcgccactggacgcggcgccgcgtaaggtggcccacact
taccgcggcgcatcagggccgctgtatgacgacatgatcacctgcgaccagtcgggacga
ctagtcgcgcacaccaccaagatgtatcccactgacgactgcactttcttcttggtatta
gcgcgtataatgtcaggcacgttatatgcggggcagacggtgcgagtgttgggggagaac
tacagcacgcaggacgaagaggattcacggataatgaacgtgggcagactctggatatac
gaggcccggtataaggtggaattgaaccgagtgccagcgggctgctgggcgctgatagag
ggcatcgaccagcccatagtgaagacgtgtaccctggtggcggcggaggaagaccaggag
ctgcacacgttcaagccgctgcggttcaacacgcaagccgtcgtcaagattgccgtcgag
cccgtcaacccctccgagctgcccaagatgctggatggactcaggaaggtgaacaagtcg
tacccgctgctgtcgacccgcgtggaggagagcggcgagcacgtgatcctgggcaccggc
gagctgtacctcgactgtgtcatgcacgacctcaggaacatgtactccgagatcgacatc
aaagtggccgacccagtggtatcattctgcgagacagtagtagagacatcctcactgaag
tgcttcgcggagacgcccaacaagcggaacaaactgaccatgatagcggaaccattagaa
cgagggctggcggaggacatcgaggccggagccgtgtgcgtcacgtgggacaggaagcgg
ctaggggagttcttccagaccaaatacgactgggacttgctagcggcgcggtctatctgg
gcgttcggccccgactccaccggacctaacatcctggtggacgacacgctgccctcagag
gtcgacaaacacttgctggcgtccgtcaaagacagcattgtacaaggtttccaatggggc
acgagggaagggccgctgtgcgaggagccgatcaggaacgtaaagttcaagatcctcgac
gcggtgatagcgcaggagccgctgcacaggggcggcgggcagattatacccactgccagg
cgggtggcgtattcagcgtttcttatggcaaccccgcggctgatggagccctacttgttc
gtggaggtgcaggcgccggccgactgtgtctctgctgtgtacactgtgctggctaagaga
agaggtcacgtaacacaagacgcgccggtccccgggtcgcccctgtacacgatcaaggcg
ttcgtgccggcgatagactcattcggcttcgagacggacctgcgcacgcacacgcaggga
caggccttctgtctgcaggtgttccaccactggcagattgtccccggcgatcccttggac
aagagtatcgttatcaggcccctggaaccgcagccagcgacgcacttggcgcgagagttc
atgatcaagacaagacgacgcaagggccttagtgaagacgtgtctatcaacaagttcttc
gacgaccctatgttgttggagctcgccaggcaagacgtacagttgatgaattaa
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