Pseudoalteromonas translucida TAC125: PSHAa1099
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Entry
PSHAa1099 CDS
T00282
Symbol
nth
Name
(GenBank) endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSHAa1099 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa1099 (nth)
Enzymes [BR:
pha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PSHAa1099 (nth)
DNA repair and recombination proteins [BR:
pha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSHAa1099 (nth)
Prokaryotic type
PSHAa1099 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAI86174
UniProt:
Q3IKC4
LinkDB
All DBs
Position
I:complement(1144554..1145204)
Genome browser
AA seq
216 aa
AA seq
DB search
MRLSNMNKEKRHQILTRLRDDNPHPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLF
PVANTPQAILDLGHDTLRDYIKTIGLFNSKAANVYKMCQILVDEHNSIVPENREALEALP
GVGRKTANVVLNTAFGWPVIAVDTHIFRVSNRTKLAMGKDVVAVEQKLEKVVPKEFKVDV
HHWLILHGRYTCVARKPKCGSCIIEDLCEFKEKTEE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttaagtaatatgaataaagaaaaacgccaccaaattcttactcgcttacgcgac
gataacccgcacccagaaaccgagcttgaatactcaagcccgtttgagttacttgtcgct
gtaacgctctcagcgcaagcaaccgatgtaggcgttaataaagccactcgaaagttgttc
cctgtggctaacacaccacaagccattttagatttaggccacgatacactgcgagattat
ataaaaaccatcggcttatttaattctaaagcggcaaacgtttataaaatgtgccaaatt
ttggtggatgaacacaacagcatagttcccgaaaaccgagaagcactagaagccctacct
ggcgttggccgaaaaaccgcaaacgtagtactcaacacagcctttggctggcctgtaatc
gccgtagacacgcatatttttcgtgtttctaatcgtactaagctcgccatgggtaaagat
gttgtagccgttgagcaaaagcttgaaaaagtagtgcctaaagaatttaaggtcgatgta
caccactggctaatactgcacgggcgttatacctgtgtggcgcgcaaacctaagtgtggc
agttgtatcatcgaagatttatgtgagtttaaagaaaagaccgaagaataa
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