Panicum hallii (Hall's panicgrass): 112874499
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Entry
112874499 CDS
T07366
Name
(RefSeq) tRNA pseudouridine(38/39) synthase isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112874499
Enzymes [BR:
phai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
112874499
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112874499
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ZapB
bZIP_1
GBR2_CC
RIMB1_N
Motif
Other DBs
NCBI-GeneID:
112874499
NCBI-ProteinID:
XP_025793625
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Position
9:complement(60987117..60994424)
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AA seq
476 aa
AA seq
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MAAAETETAAALQAEVSALRMRVQELERENQNLAKAASSCTCRFKDDSVRSVAVASSCLY
GSNPEARHNGKFHQSSPLEKDLSAPFYHSIISTENEIQRNRNVEGNGLPDDSNKRTKRRG
RQDGILSHCSKRLVALKVMYFGQRFYGFSSEGNTEPTVESEIFKALERAKLMVGSRKESC
YSRCGRTDKGVSASGQVISLYLRSDIKDVGGDMQNERSEIDYVKVLNRILPQDIRVLGWC
PVPADFHARFTCLSREYKYLFWKGDLDILEMQRAASKFVGEHDFRNFCKMDAANVSNYRR
RITEFTISACGKSSNNDELCYMTIKGTAFLWHQVRCMVAVLFLIGQGLESPSVVDSLLDI
TKTPRKPQYKMAAELPLILRSCLFDKTDFMCSSDASRSLTEHLNDQYHHYMLQAEIFHEA
LNCLPFPDAIAESNSLETLQKKRNHIPLLSRQTEPSYEERIAKVKTKLTDNLSIAS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggagacagagacggcggcggcgctgcaggcggaggtcagcgcgctgcgg
atgcgcgtgcaggagttagagagggagaaccagaatctggccaaggctgcttcgagttgt
acctgcagattcaaggacgatagtgttaggtctgttgcagttgccagttcatgtttatat
ggaagtaacccagaagcacggcacaatgggaaattccatcaaagtagccctttggaaaaa
gatttgagcgctccattttatcactcaataatatctacagaaaatgaaatacagcgcaac
agaaatgtggaaggcaatggtttgcctgacgattcaaacaaacgaactaaaagaagaggt
cgccaggatgggattttaagtcactgctcaaagcgactagttgctctcaaagtcatgtat
ttcggccagagattctatggcttttcttcagaaggtaacacggagccaacagttgagtct
gagattttcaaagcactggaaagagcaaaacttatggttggcagtagaaaagaatcatgt
tattcgaggtgtgggagaactgacaaaggagtttctgcttctggacaggtgatttcctta
tatctacgatcggacataaaggatgttggaggggacatgcaaaatgaaagatctgaaatt
gattatgtgaaggtattgaatagaattcttccacaagacatacgtgtactaggttggtgt
cctgttccagcagattttcatgcaagattcacctgtttgagcagggaatataaatactta
ttttggaaaggggacttggatatattggaaatgcagagagctgcatccaaatttgttgga
gaacatgacttcaggaatttctgtaagatggatgcagcaaatgttagtaactataggcgg
cgcattacagaatttactatttctgcatgtggcaaaagttccaacaatgatgagctatgc
tacatgacgatcaagggtaccgcttttctgtggcatcaagttcgctgcatggtagctgtg
ctatttctaataggtcaaggccttgagtcaccatctgtagttgattcactattggatatt
actaaaactcctaggaaacctcaatataaaatggcagctgagcttccattgattttgaga
tcttgtctattcgataagaccgactttatgtgttcatcagatgcgagtcggtctctgact
gagcacctgaatgatcaatatcatcattatatgctccaagctgaaatatttcatgaggcg
ctgaactgtttaccttttccagatgccattgcagaatctaattcactggaaacactccag
aagaagaggaatcatattcctctcctatcacgacaaacagagccctcttatgaggagcgt
atagcaaaagtcaagacaaagttgactgataatcttagcatagcgtcttga
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