Panicum hallii (Hall's panicgrass): 112875171
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Entry
112875171 CDS
T07366
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112875171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112875171
Transcription factors [BR:
phai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112875171
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
112875171
NCBI-ProteinID:
XP_025794697
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Position
9:complement(9784362..9789411)
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AA seq
501 aa
AA seq
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MNQFVPDWNNMGDTSRPLGEDDDLIELLWCNGHVVMQSQNNRKLPPRPEKAAGAAAPAPA
SVAQDDEAGLWFPFALADSLDKDIFSEFFCEAPAAAAPVPATPGVEDGKPCRDVPMEDDD
RHGGACAVSEAPCDLMPPPKSAPVSGSRQQTMSLADGGDNAGDLSDLFRAGSVGKAAEAG
ASSMLSAIGSSICGSNQVLVQRAVSAPGRASGSALPSATGSANANASGRGNEATVASSSG
RSNYCFGTTTATTEPTSTSNRSSKRKRLDTEDSESPSEDAESESAAMLARKPPQKLTTAR
RSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQVQVQMMW
MGSGIAASPVMFPGVHQYLPRMGVGMGAAAMPSMPRMPFMAPQPVVHNAPVNPVPLSRAG
YRGHMPAVGITEPYAHYLGVNHLQPTPSQHFAQGVGYYPLGAKAAVQQSPALHHVPGGGM
PAAAAAPGVLPPESTPSRGPG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcgtgcccgattggaacaacatgggagacacctccaggccgctcggcgaa
gacgacgacctcatcgagctgctctggtgcaacggccatgtcgtcatgcagagccagaac
aaccggaagctaccgccgaggcccgagaaggcggcgggggcagcagctcccgcccccgcg
tcggtggcgcaagacgacgaggccggcctctggttcccgttcgcgctggccgattcgctc
gacaaggacatcttctcggagttcttctgtgaagcaccggcggcggcggctccggtgccc
gcaaccccaggcgtcgaggacggtaagccctgcagggacgtcccgatggaggacgatgac
aggcacggcggggcgtgcgcggtgtccgaggccccgtgcgacctgatgccgccgcccaag
tcggcgcccgtgtccggttcgaggcagcagacgatgagcctggcggacggcggcgacaac
gccggcgacctctccgacctcttccgggcgggcagcgtggggaaggcggcggaggccggc
gcgtcgtcgatgctgagcgcgatcgggtccagcatctgcgggagcaaccaggtgctggtg
cagcgcgcagtgagcgcgccggggcgcgcgtccggcagcgcgctgccgtcggcgacgggg
agcgcgaacgccaacgccagcggcaggggcaacgaggcgacggtggcgtcctcgtcgggg
cggtccaactactgctttggcaccaccaccgccaccaccgagccgacgagcaccagcaac
cggagcagcaagcggaagcggctcgacaccgaggactccgagagccccagcgaggacgcc
gagtcggagtccgccgcgatgttggcgcgcaagccgccgcaaaagctgacgacggcgcgg
aggagtcgcgccgccgaagtgcacaacctctccgagaggaggagacgggacaggatcaac
gagaagatgagagccctgcaagagctcatacctcactgcaacaagaccgacaaggcgtcg
atgctggacgaggctatcgagtacctcaagtcgctgcaggtgcaggtgcagatgatgtgg
atgggcagcggcatcgcggcttcgccggtgatgttccccggcgtgcaccagtacctgccg
cggatgggcgtcgggatgggcgccgcggcgatgccgtccatgcctcggatgccgttcatg
gcgccgcagccggtggtgcacaacgcgcccgtcaaccccgtgccgctctcgcgggcgggc
taccgggggcacatgccggcggtgggcatcaccgagccctacgcgcactacctcggcgtc
aaccacctgcagccgacgccgtcccagcatttcgcgcagggcgtgggatactacccgctg
ggggcgaaggccgccgtgcagcagagtccggcgctccatcacgtgccgggtggcggcatg
ccggccgccgccgccgcgcccggggtgctgccgcctgaaagcactccgagcagaggacca
ggatga
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