Panicum hallii (Hall's panicgrass): 112875974
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Entry
112875974 CDS
T07366
Name
(RefSeq) 4-coumarate--CoA ligase-like 1 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00130
Ubiquinone and other terpenoid-quinone biosynthesis
phai00940
Phenylpropanoid biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
phai_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
112875974
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
112875974
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
112875974
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112875974
NCBI-ProteinID:
XP_025795773
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Position
9:61917588..61921900
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AA seq
550 aa
AA seq
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MAGTASPAAGYGSDGVYRSPRPAAHDASDPALSLSDLVLHRAAACPSALALVDAATGRAL
TFEALRSAVLATAAALSSRARVRRGDVVLLLAPNCVLYPVCFLAVTALGAVATTANPLYT
LREIAKQVADARAKLVVTVSDLLPKIADLRLPAILLDGDGASAPSNYASNVIFYSDLVAG
VQEMEYRRPPTRQSDTAALFYSSGTTGVSKGVVLSHGNFIAAVTAATSDQDELGEERNVF
LCFLPMFRIYGMSIVTLGQLQRGNTVVVMARFDLDAVLAAVERHRVTYLFCAPPVMIALA
RHGRGGRYDLSSLRCISSGGAPLGKDVMEAVANKFSGAEIIQGYGMTEICGMISLEYPQK
GCAREFGSTGALVSGVDAKIVDAKIMKHLPPNQLGEICVRGPSVMRGYFNNVQATELIIK
QGWLHTGDLGYFDERGQLYVVDRLKELIKYKGFQQIAPAELEGLLLSHPEILDAVVIPYP
DPEAGEVPIAYVVRSPNSSLSEVDVQKFIEKQVTYYKRLRKVTFVDSVPKSASGKILRRV
LIAQVRSSKL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcacggcatcaccggccgcgggttacggctccgacggcgtgtatcgttcaccg
cgcccggcggcacacgacgcctccgacccagcgctttccctctccgacctcgtcctccac
cgcgccgccgcgtgcccctccgcgctcgcgctcgtggacgccgcgacgggccgcgcgctc
accttcgaggccctccgctccgcggtgctcgccacggccgctgcgctgtcctcccgcgcg
cgcgtccgccgcggcgacgtcgtgctcctcctcgcgcccaactgcgtgctctacccggtc
tgcttcctcgccgtcaccgcgctcggcgccgtcgccacaacggccaacccgctctatacc
ctgcgggagatcgccaagcaggtggccgacgcccgcgccaagctcgtcgtcaccgtctcc
gacctcctgcccaagatcgccgacctccgcctccccgccatcctcctggacggcgatggc
gcctccgcgccttcgaactacgccagcaacgtcatcttctactcggacctcgtcgccggg
gtgcaggagatggagtaccgccggccgccgaccaggcagagcgacacggcggcgctgttc
tactcgtcgggcacgacgggggtgagcaagggcgtcgtgcttagccacggcaacttcatc
gcggcggtgacggcggcgacgtcggaccaggacgagctcggggaggagcgcaacgtattc
ctctgcttcctgcccatgttccgcatctacggcatgtccattgtcacgctcgggcagctg
cagcgcggcaacaccgtggtcgtgatggctcggtttgacctggacgccgtgctggccgcc
gtggagcgccaccgcgtcacctacctcttctgcgcgccgccggtgatgatcgcgctcgcc
aggcacgggagggggggcaggtacgacctcagctcgctcaggtgcatcagctccggcggc
gcgccgctcggcaaggacgtgatggaggccgtggccaacaaattctccggcgccgagatt
atccagggttatggtatgactgaaatctgtgggatgatatcgctggagtacccacaaaag
ggatgtgcccgtgagtttggttcaactggagcacttgtcagtggagtggatgcaaagatt
gtcgatgcaaagataatgaagcatctgcctcctaatcagctaggagaaatctgtgttcgt
ggaccaagcgtaatgcgaggatatttcaacaatgtgcaagctactgagttgataatcaag
caagggtggttgcatactggtgaccttggatactttgatgaaagaggccagctttatgtt
gtcgatagacttaaagagctgattaagtacaaaggtttccagcagattgctcctgctgag
cttgaaggattgcttctgtctcatccagaaattctcgatgctgttgtcatcccgtatcct
gatcctgaggcaggtgaagttcccattgcctatgttgtacgatcacctaacagttcactg
tctgaagttgatgtccagaaatttattgaaaagcaggtcacgtactacaagagattgagg
aaagttacgtttgtggacagtgtaccgaaatctgcttcaggaaaaattttgagaagagtg
ctcatcgcccaagtcagatcatccaagctgtag
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