Panicum hallii (Hall's panicgrass): 112876907
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Entry
112876907 CDS
T07366
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112876907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112876907
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112876907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
nSTAND3
AAA
AAA_28
SMC_N
NACHT
AAA_15
AAA_25
AAA_23
AAA_18
AAA_24
AAA_5
SRP54
AAA_30
AAA_22
Zeta_toxin
PduV-EutP
nSTAND_NTPase5
AAA_33
Arf
AAA_16
AAA_14
Rad17
Motif
Other DBs
NCBI-GeneID:
112876907
NCBI-ProteinID:
XP_025796874
LinkDB
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Position
1:complement(58598405..58602207)
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AA seq
294 aa
AA seq
DB search
MTGEGNGDEGWRRSGIEVSALQFGYDGQPPLFVRFNLRIAPGSRCLLVGANGSGKTTLLK
ILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLSYLGGSWSRTIGSAGDVPLQGDFSAEH
MIFGVDGVDPVRREKLIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVD
LDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELRKSAKYSDIEE
LKNAKNLLTVVESWLRSETKLPKKDPPRSETQPRRSSPFDSSPFRSSRHMAYYR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgaaggaaacggagacgaagggtggaggcggagcggcatcgaggtcagcgcc
ctgcagttcggctacgacgggcagccgccgctcttcgtgcgattcaacctccgcatcgcc
cctggctcccgctgcctcctcgtaggcgccaatggatcaggcaagactacactcttgaag
attcttgcgggaaagcatatggttggaggaagggatgtggttcgtgttctcaatggttca
gcttttcatgatactcagctggtgtgcaatggcgacctttcgtacttggggggctcttgg
agccggactattggttcagctggcgatgttcctctgcaaggtgacttctctgctgagcac
atgatttttggagttgacggggttgatcctgttaggcgagagaagctgattgatctgcta
gacattgatctgcaatggcgcatgcataaagtttcagatggacagcgccgcagggtgcaa
atctgcatgggtcttcttcatccatacaaggtgcttttacttgatgaaatcaccgttgat
ctggatgttgtgaccagaatggatctccttgacttctttaaggaagagtgcgagcagaga
gaagccaccattgtgtacgccacccacatattcgatgggttagagacatgggctaccgac
attgcatatatccaggagggcgaactgagaaaatcggcaaaatactcggacatcgaagag
ctgaagaatgccaaaaacttgctgaccgtcgttgagtcatggctccgatcagagaccaaa
ctccccaagaaggatcctccacgttcagagacccagcccaggcgctcctcgccgtttgat
agttctcctttccgctcatctcgccacatggcatactaccgttga
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