Panicum hallii (Hall's panicgrass): 112876955
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Entry
112876955 CDS
T07366
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112876955
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112876955
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GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
HEAT_EZ
Cnd3
Cnd1
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
112876955
NCBI-ProteinID:
XP_025796925
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Position
9:65155072..65160215
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AA seq
824 aa
AA seq
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MGDPHLLSSAHSAAASSSSARKHPGPIDERFSDPSPSITKRPRVAAEPPAPRDSAPYPEA
EVRSLFMMAGGIYPLARAEALRGLAAVLEKVDAGCGVGARIADCCYECAVELMRDDDEGV
RLAVVRLVGLCAQKFAARTDVDAKGHGDLMDLIFLQLSSMARDMCTKVRIEAFGTLGKMQ
QVSEDVLLQSLSKKVIKTDTMSGCIINGQKLPPKLKIPCAAGIFAHGIEDEFYQVRTAAC
TSLGALAKFSSQYAEKALDLLMDMMNDDTEAVRLQTLQALFHMATYGYLSMQEKHMHMFL
GLLVDANASIRNAAHKILGLVNLPKLQMFKSALDGLITSLEKNPEEQDIYGILFSIGKNH
GSFSANIAKHLAKEITMASDGELILDKPRIKALLIVSISAPFSDDKHKKLDIPSIIFSHA
ISLLEKVSSALGEEVNQDSILSYLCHKGGMPFWGNRPISTEFGESESCKVETVEVGVKIE
NTAKAAKYLDRVLQSMESILQTVEGAWTMKMSSDIFEAKTILRTCKEELKVLTENSSGSI
GAFSSFLCDYLHAIHLIVEIWQLIKLDNSYTFGLTSLAILLEKLNISIRRLEYCYAGLNG
ELEVQVLELSLLANLFGLSKIGACSKVVLGELLWIISRLEGLCADGSCELSDFSREIKKA
FDANPIGDTLIGNIHTLFELFRVKPTRDFGMLKEISAVLQVCDNSSENPLSYICGLPVGI
SFNISLWNISSHHRLWFRMSVGESVQHAFLEFSSFEGNEELKNGSMVVPLDATPMAHSFV
LRVCLLMECSYGISINQGGHGGPTDCFVQLSDELDVYFVSTGQR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacccgcacctcctctcctccgcccactccgccgccgcctcctcctcctccgct
cgaaaacaccctggccccatcgacgagcgcttctccgatcccagtccgtccatcaccaag
cggcctagggttgcggcggagccgcccgcgcccagagactcggctccgtaccccgaggcg
gaggtccgatctctcttcatgatggccggaggaatctaccctctggcgcgggccgaggcg
ctccgcggcctcgccgcggtcctcgagaaggtggacgccggctgcggtgtcggggcaagg
attgcggactgctgctacgaatgcgcggtggagctcatgagggatgacgacgagggcgtc
aggctggccgtcgtgcgattggtaggcctatgtgctcagaagtttgctgcgagaacggat
gtcgatgccaagggccatggtgacctcatggacttgattttcctacagcttagctctatg
gctagggacatgtgcacaaaagtgagaattgaagcatttggtacccttggtaaaatgcaa
caagtttccgaggatgtattacttcagtcgctgtctaagaaggttataaaaactgacact
atgagtggttgtatcatcaacgggcaaaagttacctcctaagttaaaaattccctgtgct
gctggcatttttgcccatggaattgaagatgagttttaccaggtgcgaacagctgcctgt
acatcattgggagcactggcaaagttttctagtcagtatgcggagaaagccttggacttg
ttgatggacatgatgaatgatgatacagaagcagttaggctgcagactttgcaagcacta
tttcatatggcaacatatggatatttgagtatgcaagagaagcacatgcatatgtttctt
ggcttgctggttgatgccaatgcctcaattcgaaatgcagcacacaagatccttgggtta
gtcaacctgcccaaacttcaaatgttcaaatctgcacttgatggtctcattacaagtttg
gagaaaaatcctgaggaacaagacatatatggtattcttttttctattggtaagaatcat
gggagcttttcagctaacatagctaaacatttggccaaagagatcacaatggcatctgac
ggagagcttatcttggacaaacctaggatcaaagcattgttgatagtgtcaatctcagca
cctttttctgatgataagcacaagaagttggacataccttcaattatcttctcacatgca
atttccctattggagaaggtttcgtctgcactcggagaagaggttaatcaggattcgatt
ttatcctacttgtgtcataaaggtggaatgccattttggggaaacagaccaatatctaca
gagtttggagaatctgaaagctgcaaagttgaaactgtggaagttggtgtcaaaatagaa
aatactgcaaaggcagctaagtatctagatagggtattgcaatccatggaatccatacta
caaactgttgaaggagcctggactatgaaaatgtcaagcgatatttttgaagccaaaact
attttgagaacatgcaaagaagagctaaaagtattgactgaaaattcttctggatcaatt
ggtgcattctcaagctttctatgcgattatcttcatgcaatacacttgattgttgaaata
tggcagttgattaaattggataattcttatacttttggcttaacatcacttgctatttta
ctggagaagttgaatatatccataagaaggctggaatactgttatgctggattaaatgga
gaattagaggttcaagtgttggagctttctttgttagctaatttatttggattgtcaaag
atcggagcttgttcaaaggtagttctaggtgagttgctttggattattagtcgcctagaa
ggtctgtgcgctgatgggtcctgtgagctctctgacttcagcagggaaattaagaaagcc
tttgatgccaatcctattggcgatactctgatcggcaacattcacactttgtttgaactc
ttccgtgtaaaaccaacaagagattttggaatgcttaaagagataagtgctgtgttgcaa
gtttgtgataacagttctgagaatccactatcatacatttgtggattaccagtaggtatc
agttttaacatatctctgtggaacatatctagtcatcatagattgtggttccgcatgagc
gttggtgagtccgtgcaacatgccttcttagagttttcctcttttgaaggtaatgaggag
ctgaagaacggctctatggttgttccacttgatgctactccaatggcgcattcatttgtc
ctaagggtatgtctgctaatggagtgttcatatggtatcagcatcaaccagggaggacat
ggaggaccgactgattgttttgtccaactctctgatgaactggatgtttattttgtcagt
actgggcaaaggtga
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