Panicum hallii (Hall's panicgrass): 112878854
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Entry
112878854 CDS
T07366
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112878854
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phai01007
]
112878854
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112878854
Enzymes [BR:
phai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
112878854
Amino acid related enzymes [BR:
phai01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112878854
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112878854
Prokaryotic type
Other AARSs
112878854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
112878854
NCBI-ProteinID:
XP_025798882
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All DBs
Position
1:57227893..57237682
Genome browser
AA seq
1064 aa
AA seq
DB search
MDAASCCRVFSTQRCRFPLRRLAAPPWSQPFCTESSGGLSAASISKRRSRGPVMAAKKAE
QDCLLVLGAKQEDGKYKHTVDLPKTTFGLRANSVVREPELQKLWEENQVLKRVSERNSGA
TFVLHDGPPYANGDLHMGHALNKILKDIINRYKLLQNHKVSFVPGWDCHGLPIELKVLKS
MDKETLGALTPIKLRQKAAKFAKATVDAQMKSFKRYGVWADWSNPYLTLSPEYEAAQLEV
FGQMVMKGYIYRGRKPVHWSPSSRTALAEAELEYSENHVSRSIYAAFKITNPSKSGMLDE
FLPNVSLVIWTTTPWTIPANAAVAVNPELAYAVAEVQSVLLSESTSGGKKKKVGSVLSSE
KGKLFVIVASDLVTTLESKWGVKLVVQKSFPGSALEHCRYVHPVNGNECSVVLGGDYITT
ESGTGLVHTAPGHGQEDYITGLKYGLPIISPVDDEGNFTAEAGQFSGLSVLGAGNAAVVK
YLDEQYSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRNAAMDAIRQVAWVPSQ
AENRIVAMTSGRSDWCISRQRTWGVPIPVFYHVDSQEPLITEETIEHIKAIVSKKGSDAW
WYMTTEELLPDKYRDKASEYRKGTDTMDVWFDSGSSWAAVLAKRDGLKFPADIYLEGSDQ
HRGWFQSSLLTSIATTGKAPYSSVITHGFVLDEKGFKMSKSIGNVVDPVKLIDGGKNQRE
EPAYGADVLRLWVSSVDYTGDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKLDNSVP
YSDLPKIDKYALFQLETVVASMKDSYENYQFFKVYQMLQRFAIVGLSNFYLDVAKDRLYV
GGRVSFTRKSCQTVLTAHLLYLVRVIAPIMPHLAEDVWQNLPFQYTLQDGSVAKFVFDLK
WPEKNEEWLSVPKDDIDFLGIILELRSEVNKILENARTGKLIGSSLDAKVYIHAESSDTA
LKLKELSSASNDADALHRLFITSQVEVLTTLNEETTSSVSYTGKFSDPRTGDIWIGVTRA
DGAKCERCWNYTRDVGSFHDHPTLCARCYGVIDLQPQPAAAAVS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcctcatgctgccgcgttttctccacgcagcggtgccggttcccgctgcgc
aggctggcagcgccgccgtggtcgcagccgttctgcaccgagtcgagcggcggcctctcc
gccgcgtcgatctcgaagcggaggtccaggggccccgtcatggcggcgaagaaggctgag
caggattgtttgctcgtgctaggtgcaaagcaagaggatggaaagtacaagcacacagta
gatctaccgaaaacaacatttgggttgagagcgaattctgttgtaagggaaccagagctc
caaaaattatgggaggagaatcaggttctgaaaagggtatctgaaaggaacagtggggct
acatttgttcttcacgatggccctccttatgctaatggcgaccttcacatgggccatgcg
ctcaataaaatcctcaaagatattataaatcgttacaagttgcttcagaatcataaagtg
tcttttgttcctgggtgggattgccacggccttccaatagaactaaaagttttgaagtca
atggataaggaaactttgggtgctcttacacccataaaattaaggcaaaaagctgcaaaa
tttgctaaagcaacagttgatgcacaaatgaaatctttcaagcggtatggtgtatgggct
gattggagcaatccttacctaactctgtcaccagaatatgaagctgctcagctggaagtt
tttggtcaaatggttatgaaaggatatatctatagaggacgaaagcccgtccattggagt
ccatcatcacgtacagctttggcagaagctgaactggagtattccgagaatcatgtttcc
agaagcatatatgctgcattcaagattacgaatccatctaaatctgggatgctggatgaa
tttcttccaaatgtatctttggtcatatggaccaccactccatggacaatcccggctaat
gctgctgttgctgtgaaccctgagcttgcttacgctgtagctgaggtacaatctgtactc
ttaagtgaatcaacatctggtggtaaaaaaaaaaaggttgggagtgtgttgagctctgaa
aaaggaaaattgtttgttattgtggcttctgatcttgtcacaactcttgagtccaagtgg
ggtgtgaagcttgtagtacagaaatcatttcctggatctgccttggagcactgcaggtat
gtccatcctgtgaatggcaatgaatgttctgtagttcttggaggggattacattacaact
gaatctggaactggccttgttcatactgcccctggccatggccaggaagactacataaca
ggtctgaagtatgggcttcctattatttctcctgtggatgatgaaggaaacttcaccgct
gaagctggacagtttagtggtttgtctgtcctgggagctggcaatgccgcagttgtgaag
tatctggacgaacaatattccctcattttagaagagccttacaaacacaagtacccctat
gattggagatctaaagaaccaactatattccgagcaaccgaacagtggtttgcatctgtg
gatggtttccgtaatgctgcaatggatgcaatcagacaagtagcttgggttccttctcag
gctgaaaacaggattgttgcgatgacctccggccgttcggattggtgtatttcacggcag
agaacttggggtgttcctattccagttttttaccatgtggactcacaagaacctcttata
actgaagaaactattgaacatatcaaggctatcgtgtcaaagaaaggtagcgatgcatgg
tggtatatgacaactgaggaacttcttccagataaatatcgggacaaagcatctgaatat
cgcaagggaactgatacaatggatgtttggtttgactctggctcttcgtgggcagctgtt
ttagcaaaaagggatggtcttaagtttcctgcagatatttatcttgaaggttcagatcaa
catcgtggatggttccagagctcattgttgactagcattgctactacagggaaggctcca
tactccagtgttattacacatggatttgtactggatgaaaagggtttcaaaatgagcaaa
tctattggtaatgtggtggatccagtgaaattgattgatggtggcaaaaaccaaagggaa
gaacctgcctatggagcagatgttctccgtctatgggtttctagtgttgattacactggc
gatgtgttgattggtccacaaatcttgcgccagatgtctgacatgtatagaaaactacga
ggcacgatgcgatttctgttgtcaaatctccacgattggaaactggataattcggtgcca
tacagtgatctaccaaaaattgacaagtatgcacttttccaactggaaacagttgtggct
tctatgaaggatagttatgaaaattatcaattctttaaagtatatcagatgcttcaaaga
tttgctattgttggtttgtccaatttttatttggatgttgccaaggatcggctttatgtt
ggaggccgggttagcttcacaaggaaaagctgtcagactgtcctcacagcacatctgctc
taccttgttagggtcattgccccgattatgcctcacttagctgaggatgtctggcagaac
ctaccttttcaatacaccttgcaggatggatccgttgcaaagtttgtttttgacctaaaa
tggccagaaaagaatgaagaatggctctcagtccccaaggatgacattgatttcctgggc
attatccttgagttgaggtcagaggtcaacaaaattttggagaatgctcgcactggaaag
ttgataggttctagcttagatgcaaaggtgtatatccatgctgaaagttcagatacagca
ttaaagctaaaggagctatcttctgcctctaatgacgcagatgctctgcatcgcctgttc
atcacatctcaggtggaggttctcacaaccctaaatgaagaaactacatcatctgtatct
tacacaggaaagttcagtgacccacgcactggagacatatggattggcgtgactcgtgca
gatggtgctaaatgtgaaaggtgctggaactacacccgggacgttggatctttccatgac
catcctactctatgcgcacggtgctatggtgtcattgatttgcagccacaacctgctgcc
gctgctgtcagttga
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