Panicum hallii (Hall's panicgrass): 112880827
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Entry
112880827 CDS
T07366
Name
(RefSeq) basic helix-loop-helix protein A
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112880827
Transcription factors [BR:
phai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112880827
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
112880827
NCBI-ProteinID:
XP_025801359
LinkDB
All DBs
Position
2:complement(6987230..6991370)
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AA seq
649 aa
AA seq
DB search
MAVGGEAVQKALQTVAEGTEWTYSVLWKLCPHQGALVWAEGHYNGAIKTRKTTVAPGGNQ
EEEDAAAGRRRSRQLRELYDSLAGDAAAAGGRDAVARRPSAALAPEDLTETEWFYLMCAS
YCFPPGIGLPGEAFARRGYVWLCGANKVDSKVFSRAILARSAGIETVACIPVNDDGILEI
GTTEKVAEDSGLIQYARSIFMDQHGIPIMPTLSGHSTSTQSTHINHQPFQIKMEKYAGGI
NVQPNTLNTEDEHIETEEEDDRIDSETNTENGSRRHLPPDNMGNEQARPNARSSDLMQIE
ASESFRDGCTNHVDDEISMLMICQNAAQDQAALAENAHYIETVLTILRRNACRRAQAAPS
IRTYLALSKNSSFSRWNPKGTSDLQLMLISDEGSPQRMLKSILFIGAPARHSHHQMLRGE
VQSPEPSRDDGEGTSRSRRGGQGQAELSASHVLKERQRREKLNERFVVLRSLVPFVTKMD
RASILGDTIEYVKQLRRRIQDLESRARLQIDGGYLTAPAPKRAHQSASSAAAMAETGSNK
MRAVEASSSCSTSGGAVRPAASAAASTEVQVSIIGSDALVELRCPRRDGLLLRVMLTLHR
ELGLEVASVQASSAGDVLLVELRAKVREVHGRKSIDEVKRAIHLIILSD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgggcggcgaggcagtgcagaaggcgctgcagacggtggcggagggcacggag
tggacgtacagcgtcctctggaagctctgcccgcaccagggcgcgctggtgtgggcggag
ggccactacaacggtgccatcaagacgcgcaagacgacggtggcgccgggcgggaatcag
gaggaggaggacgcggcggcggggcggcgccgcagccggcagctgcgggagctctacgac
tcgctggcaggggacgccgccgctgctggcggcagggacgccgtggctcgccggccgagc
gccgcgctggcgccggaggacctcacggagacggagtggttctacctcatgtgcgcatcc
tactgcttccctcctggcatcgggttgcctggggaggcatttgcaaggagaggttatgtg
tggctctgtggggcaaacaaagttgacagcaaagtattttcaagagcaattcttgccagg
agtgcaggtatcgagacagtcgcctgcattccagttaatgatgatggtatcctggaaatt
ggaactacagagaaagtagcagaagacagtggtttaattcagtatgctaggagcatcttc
atggatcagcatggcatccccataatgccaaccctctcaggccattcaacttccacccaa
tccacacacattaatcatcagccattccaaataaaaatggaaaaatacgctggcggcata
aatgtgcagccaaatactctcaatacagaagacgagcacatcgaaacggaagaggaagat
gacagaattgattcagagaccaatactgaaaatggttcacgccggcatctgccaccggac
aatatgggcaatgagcaggcaaggcccaatgcacggagcagtgatctgatgcagattgag
gcgtcggaaagctttagggatggttgcacgaaccacgtggatgacgagatctcaatgctt
atgatttgccagaacgcagcacaagatcaagcagcactagccgaaaacgcgcactacatc
gaaacagtcctgacaatcttacggcgcaacgcgtgtcggcgagcgcaagcagccccgagc
atcagaacctacctggcactctctaagaactcgtcgttctcaagatggaaccctaaagga
accagtgatctccagctgatgttgatctctgacgaaggctccccacagagaatgctcaag
agcatcctgttcatcggtgcacctgctagacacagtcatcaccaaatgctcagaggagag
gtccagtcacctgagcccagcagggacgacggcgaaggtaccagccgatcacggagagga
ggacagggccaggcagagctgagcgccagccatgttctcaaggagcggcagaggagggag
aagctcaacgagaggttcgtcgtcctgcggtcactggtgccgttcgtcaccaagatggac
agggcgtcgatcctgggcgacacgatcgagtacgtgaagcagctgcggagacgcatccag
gacctggagtcacgagcccggctacagatcgacggcggctacctgacggcaccagccccg
aagagagctcatcagagcgcaagctcggcggcggcaatggcggagacggggagcaacaag
atgagagccgtggaagcgagcagcagctgcagcaccagcggcggcgcggtcaggccggcg
gcgtcggcggcggcgagcacggaggtgcaggtgtccatcatcgggagcgacgcgctggtg
gaactccggtgcccgcgcagggacgggctcctgctccgggtcatgctgacgctgcaccgg
gagctcggcctggaggtggcctccgtccaggcctcgtcggccggcgacgtcctgctcgtg
gagctgcgcgcaaaggtgagggaagtgcatgggagaaagagcatcgacgaggtgaagaga
gcgatccatctaatcatcttatctgactga
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