Panicum hallii (Hall's panicgrass): 112883054
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Entry
112883054 CDS
T07366
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112883054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112883054
Transcription factors [BR:
phai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112883054
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
112883054
NCBI-ProteinID:
XP_025804057
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Position
2:1640711..1644917
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AA seq
397 aa
AA seq
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MDGGERPAATQKRPFPPEGELVELMWQDGAVVAHSQAQRAFAGAGNTGASGVTGEAPAAW
LPGAGGALGGDVYSQLWQSIAQADGRVGADARARPPARSGNSAAGSSRTAGEVGSSFCGS
NLVAAALHLDDDIDDVAAPPPPPPDEPCACGGASMSSGWNSNGLLKRSRDEFDGRSEHLQ
DADFDTVDETPPSRRPASKRRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKAS
ILDEAIEYLKSLQMQVQIMWMSSGMAPMMLPGAHQLMPPMSMGLNSACMPPAAQFLSQIQ
RVPPFLSNPLPNQIPQISPAATSAPNVTNQVQSNRMAQPRNPFLHPNDALTSTPQLPSLF
GYGPQMAQENEIQELLACTAAPALGADPQSSSDGTGT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggcgagaggccggcggcgacccagaagagacccttccccccggagggcgag
ctcgtggagctgatgtggcaggacggcgccgtcgtggcgcactcgcaggcgcagcgggcc
ttcgccggcgccggcaacacgggcgcgagcggcgtcaccggggaggcgccggcggcgtgg
ctcccgggcgccggcggcgcgctgggcggggacgtgtactcgcagctctggcagagcatc
gcgcaggccgacgggcgcgtgggcgcggacgcccgggcccgcccgcccgccaggagcggg
aacagcgccgccgggtcgagccggacggccggagaggtcgggtccagcttctgcggcagc
aacctcgtggcggcggcgctgcacctggacgacgacatcgacgacgtcgcggcgccgccg
ccgccgccgccggacgagccgtgcgcgtgcgggggcgcgtccatgtccagcggctggaac
agcaatgggctgctcaagagaagcagggacgagttcgatggccgcagcgagcatttgcag
gacgccgacttcgacaccgtcgacgagacaccgccgtcgaggcggccggcgtccaagcgc
aggacgcgcgccgccgaggtccacaacatgtcggagaggaggagaagggaccggatcaac
gaaaagatgcgagctttgcaagaactggtgccccactgcaacaagaccgacaaagcatcg
atactagatgaggcaattgagtacttgaagtccctccaaatgcaagttcagatcatgtgg
atgagttctgggatggcgccgatgatgctcccaggtgctcaccaactcatgcctccaatg
agcatgggcttgaattcagcctgtatgccaccggcggcgcaattcctcagtcagattcaa
agagtaccacccttcctcagcaacccgttgccgaatcagattcctcagatctcacctgca
gctaccagtgcacccaatgtaacaaaccaagttcaaagcaaccgcatggcccagccgaga
aatccatttcttcatcctaatgatgcattgacatcaacacctcagttgcctagtttattt
ggctatggaccacagatggcacaagagaacgagattcaagagttactggcttgcactgct
gctccagctttgggtgccgacccacagtcttcctctgatggaacaggaacgtaa
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