KEGG   Panicum hallii (Hall's panicgrass): 112883587
Entry
112883587         CDS       T07366                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phai03400]
    112883587
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      112883587
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-RING_5 ResIII zf-RING_Vps41 RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 zf-RING_6
Other DBs
NCBI-GeneID: 112883587
NCBI-ProteinID: XP_025804695
LinkDB
Position
2:50806787..50813397
AA seq 864 aa
MPRRAGNPSSGSSRGRRRRRDEEDEDELSSNTTSDSDFVADSEEEVGDDDEGFASDEDAP
PAPAPAPAMAAPPPPPMLMPVPNRARNRGGQRRRGKKARDEDLPPLPWQVWEAANDRWLD
EREKPPGHGGPPDDAGAAAAGAGAPVPTADPAPEVVLPLLRFQKEWLAWALAQEASVSRG
GILADEMGMGKTIQAISLVLTARRLRPPGHHHSAASSSSSSAGRPMRQVGCTLVVCPVVA
VIQWTEEIERHTASGSARVLIYHGAKRGTKKFDFNNYDFVVTTYSTIEADYRKHIMPPKI
RCQYCDKLFYPNKLKVHLKYFCGPDAVRTEKQAKQQSKKWGGSRGKGKGSGHKKDGDEEN
KDFDELADEPVSQSRGQSPLHSVRWERIILDEAHFIKDRRCNTARAIFALESEYKWALSG
TPLQNRVGELYSLIRFLQIFPYSNYFCKDCNCEILDTSMKKQCDCGHSSVRHFCWWNKYI
ARPIQWGSASDEGKRAMMLLKEKVLKGIVLRRTKKGRAADLALPPKIVTLRRDSFDKNEM
EFYEALYTQSVTQFDSYVVAGTLMNNYAHIFDLLTRLRQAVDHPYLVAYSKTAGPREGFK
NEGNESMESQCGICHNVAEDVVVTSCDHAFCKTCLMDYSATLGNVSCPSCSVPLTVDLTT
KGSVGKVTPSVKGRKRSGILSRLASLEDFKTSTKIDALREEIRNMIEHDGSAKGIVFSQF
TSFLDLIQFSLEKSGIKCVQLNGAMNITEKGRAIDNFTNDPDCRIFLMSLKAGGVALNLT
VASHVFVMDPWWNPAVESQAQDRIHRIGQFKPIKSTRFVIKDTVEERILQLQEKKQLVFE
GTVGDSPDAMSKLTEADLKFLFQI
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgccgcgccgagccgggaacccctcctccggatccagccgcggccggcgccgccgccgc
gatgaggaggacgaggacgagctctcctcgaacaccacctccgactccgatttcgtcgcc
gactccgaggaggaggtgggggacgacgacgaggggttcgcgtccgatgaggacgcccct
cccgcgcccgcgcccgcgcccgcgatggcggcgccgccaccgccgccgatgctgatgccg
gtgccgaatcgggcgcggaaccggggtgggcagaggaggagggggaagaaggcgagggac
gaggacctgccgcccctgccgtggcaggtgtgggaggcggccaacgacaggtggctcgac
gagcgggagaagccccccggccacggcgggccccccgacgacgccggggccgcggctgcg
ggggcgggggcgcccgtgcccaccgcggacccggccccggaggtggtgctcccgctgctg
cgcttccagaaggagtggctcgcctgggcgctggcgcaggaggcctccgtctcgcggggc
ggcatcctcgccgacgagatggggatggggaagaccatccaggccatctcgctcgtcctc
accgcgcgccgcctccggcccccgggccaccaccactccgcggcatcctcctcctcatcc
tcagcggggcgcccgatgcgacaggtcgggtgcacgctggtcgtctgcccggttgtggcc
gtcatccagtggacagaggagatcgagcggcacaccgccagtggcagcgcgcgcgtgcta
atctaccacggcgccaagcggggcacgaagaagttcgacttcaacaactacgacttcgtc
gtcaccacctactccaccatcgaggcggactaccggaagcacatcatgccacccaagatc
cggtgccaatactgtgacaaattgttttaccccaacaagctgaaggtgcacttgaagtat
ttctgcggacctgatgccgtgcgcacagagaagcaggcgaagcagcagagcaagaagtgg
ggcggcagcaggggaaagggaaagggaagtggtcataagaaggacggtgatgaggagaat
aaggattttgatgaattggctgatgaaccagtcagccagtcaaggggtcagtcgcctctg
cactctgtacggtgggagcggatcatcttggatgaggctcacttcataaaagatagacgg
tgtaatactgcaagggctatttttgcattagagtcagaatacaagtgggctctgagtggg
acacctttgcagaaccgcgttggagaactttactcacttattcgcttcttgcaaatcttc
ccctattcgaactatttctgcaaggactgtaactgtgagatactagataccagtatgaag
aaacagtgcgactgtggtcactcatctgttaggcacttctgctggtggaataagtacata
gcgaggccaatacagtggggttcagcaagtgatgaaggcaaaagagccatgatgcttctg
aaggagaaagttctgaaaggcatagtgttaaggcgcaccaaaaaaggccgggctgcagat
cttgctctcccaccaaagattgtgacattgaggcgggactcttttgataaaaacgaaatg
gaattctatgaagctttgtatactcaaagcgtcacacagtttgattcatatgtagttgct
ggaacactgatgaacaactatgctcatatcttcgatcttctcacgaggttgagacaggct
gttgatcatccttaccttgtagcatattctaagacagcaggacctcgtgaaggatttaaa
aatgaaggaaatgagtccatggaaagccaatgtggtatatgtcataatgtggctgaagat
gtcgtggttacctcttgtgatcatgcattctgcaagacttgtttgatggactactctgca
actttggggaatgtttcatgtccatcctgttcagtacctcttactgtcgacttaacaaca
aaaggttcagttggaaaagtaactcctagtgtcaagggtcgcaaacgctctggaatactg
agcagactagcaagccttgaggattttaagacaagtacaaaaattgatgccttgagagag
gagatacgaaacatgattgagcacgatggctctgccaaagggattgtgttcagccagttc
acatcattcttggatctgattcaattctccctggagaagtccggcatcaagtgtgtccag
ctgaatggggccatgaacattaccgagaagggaagagccatagacaacttcaccaatgac
ccagactgcaggatcttcctgatgagcctgaaagctggaggagtagctctgaatctcact
gttgcatctcatgttttcgtgatggacccttggtggaatccagcggtcgagagccaagcc
caggatcgcatccaccgaatcggacagttcaagccaatcaagagcacgaggtttgtgatc
aaagacaccgtcgaagagcgcatactgcagctgcaagagaagaagcagctggtgttcgaa
ggcaccgtgggcgactcgccggatgccatgtcgaagctcacagaggccgacctcaagttt
ctgttccagatctaa

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