Panicum hallii (Hall's panicgrass): 112884480
Help
Entry
112884480 CDS
T07366
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112884480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112884480
Transcription factors [BR:
phai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112884480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
112884480
NCBI-ProteinID:
XP_025805660
LinkDB
All DBs
Position
3:62448986..62452283
Genome browser
AA seq
468 aa
AA seq
DB search
MNQYVPDWSSSMGDAFATLNGGDDDGLMELLWCNGHVVMQSQAPRKPTRPEKVAAAAAAA
AAQDDEAAAWFQYPAEDALERDLFTELFGEAQAADAGSGRACKEEAECGGEAAARRSGLM
PPPWEKECPGELGDVAAGGECTATATEAGESSMLTVGSSFCGSNHVQTPRARATCGGAAA
PGAAGKAGGSARDAATVTSSSMRPRSCTTKAGQPSATAHRSGKRRPSDATETEVRVPPIA
INPPCVPDQSMTLTRPKIQDAEFESADATCEPAQKLTTAKRRRAAEVHNLSERRRRDRIN
EKMKTLQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMGGGMAAAAAPVMFPAGVHQYMQ
RMVAPSHVASMPRMPFMAPPAVQSPPGADPYARYLAVDHLQPPPPPPAPMHYLQGMGFYQ
QQQSSAPPPPAVPAGSLPAATSRTSPPDGPLHKKYESCGMPEIQGITS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtacgtccctgactggagcagcagcatgggggacgccttcgcgacattgaac
ggcggcgacgacgacgggctcatggagctgctctggtgcaacggccacgtggtcatgcag
agccaggcgccgaggaagccgacgaggcccgagaaggttgcggcggcggcggcggcggcg
gcggcgcaggacgacgaggcggcggcgtggttccagtaccctgcggaggacgcgctggag
agggacctattcacggagctcttcggggaggcgcaggcggccgacgccggcagcggcagg
gcgtgcaaggaggaggcggagtgcgggggcgaggccgcggcccgccggagcgggctgatg
ccgccgccgtgggagaaggagtgcccgggggagctcggcgacgtggccgccggcggcgag
tgcacggcgacggcgacggaggccggcgagtcgtccatgctgacggtcgggtcgagcttc
tgcgggagcaaccacgtgcagacgccgcgcgcccgcgccacatgcggcggcgcggcggcg
ccgggggccgcggggaaggccggtggcagcgcccgcgacgcggcgacggtgacctcgtcg
tcgatgcggccgaggtcctgcaccaccaaggccgggcagcccagcgctaccgcccaccgg
agcggcaagcggaggccgagcgatgccacggagaccgaggtacgcgtgccgccgattgcg
atcaatccaccttgtgtaccggatcaatcgatgacattgacacggccaaaaattcaggac
gcggagttcgagtccgccgacgcgacgtgcgagccggcgcagaagctgacgacggccaag
cggcggcgagctgccgaagtccacaacctctcggagcggagaagaagggacaggatcaac
gagaagatgaagaccctgcaggagctcattcctcactgcaacaaaacggacaaggcgtcg
atgctggacgaggcgatcgagtacctcaagtctctgcagctccagctgcagatgggcggc
gggatggcagcggcggcggcgccggtgatgttcccggcgggggtgcaccagtacatgcag
cggatggtggccccttcccacgtggcgtccatgcccaggatgccgttcatggcgccgccg
gccgtgcagagcccgccgggggccgacccctacgcgcgctacctcgccgtcgaccacctg
cagccgccgccaccaccgccggcccccatgcattacctgcaggggatgggcttctaccag
cagcagcagagctcggcgccgccaccacccgccgtgccggccggcagcctgccggcggcg
acttcacggacgtcgcctcccgacggccccctgcacaaaaaatacgaaagttgtggcatg
cctgagatccagggtatcaccagctga
DBGET
integrated database retrieval system
