Panicum hallii (Hall's panicgrass): 112888831
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Entry
112888831 CDS
T07366
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112888831
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phai01007
]
112888831
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112888831
Enzymes [BR:
phai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
112888831
Amino acid related enzymes [BR:
phai01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112888831
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112888831
Prokaryotic type
Other AARSs
112888831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
112888831
NCBI-ProteinID:
XP_025810958
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All DBs
Position
4:complement(4604970..4618163)
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AA seq
1172 aa
AA seq
DB search
MDDVCEGKDFSFPAQELRVLQLWKAIDAFHEQLRRTEGGEEFVFYDGPPFATGLPHYGHI
LAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDKALGITNRQQVFDIGIAKYNET
CRSIVTKYVSEWEAVVTRTGRWIDFKNDYKTMDINFMESVWWVFAQLWQKDLVYKGFKVM
PYSTGCKTALSNFEAALDYRTVPDPAVMVSFPIAGDADNAALVAWTTTPWTLPSNLALCV
NANLTYAKVKDKSTAAVYIVAESRLGQLPVKVKASGKKQAPSKGSNAEAVQDGLDKESYE
LLAKIPGSSLVGLKYTPLFDFFMELQETAFRVIADNYVTDDSGTGVVHCAPAFGEDDHRV
CLAAGIFETAGLVVAVDDDGCFIEKITDFKGRYVKEADKDIINAAKDKGRLVSKGSIEHS
YPFCWRSGTPLIYRAVPSWFVKVEKIKDQLLECTKETYWVPEYVKEKRFHNWLEGARDWA
VSRTRFWGTPLPLWMSQDGEEIVVMDSIEKLEKLSGVKVTDLHRHYVDDITIPSKRGPEF
GVLKRVDDVFDCWFESGSMPYAYIHYPFENKELFEKNFPGNFVAEGLDQTRGWFYTLMVL
STALFGKPAFKNLICNGLVLAEDGKKMSKSKKNYPSPTDLIDEYGADALRLYLINSPVVR
AESLRFKRSGVYSVVKDVFLPWYNAYRFFVQNAKRLEVEGLAVFSPIDQASLLKSSNVLD
HWINSATESLVSFVQQEMDAYRLYTVVPYLVKYIDNLTNIYVRLNRKRLKGRTGEEDCRI
SLSTLYYALVTTCVAMAPFTPFFTEVLYQNLRKVSNKSEESIHFCKFPSTTGERDERVEQ
SVNRMMTIIDLARNIRERHNKALKTPLKEMVVVHPDNEFLEDITGKLKEYVMEEINVKTV
TPCNDPLVYASLRAEPNFSVLGKRLGKDMGKVSNEVKKMTQEHVLAFEERGEVTFFGHCL
KQDDIKVVRQFKRPENVSEKEIDAAGDGDVLVILDLRADQSLFEAGVAREVVNRIQKLRK
TAQLEPSDPVDVYYKSVDHDKNTLGEILNSQDRYIRDALGSPLIPKEMAPTDVVLLAEES
HDVHDMSFVICIARSCPVLSPDLLAHASGNNDHVEALRVHLLSRSLSRLKNQFQAGNGMI
TVDCIEGYPPINLQLGKHIFLSAGDFYLASRS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtgtgcgaggggaaggacttctccttcccggcgcaggagctgcgggtgctc
cagctgtggaaggcgatagacgccttccacgagcagctccgccgcacggagggcggcgag
gagttcgtcttctacgacgggccccccttcgccacgggcctgccccactacggccacata
ctcgccggcaccatcaaggacgtggtcacccgccaccagtcgatgcggggccgccacgtc
tcgcgccggttcgggtgggactgccacggcctccccgtcgagttcgagatcgacaaggcg
ctcggcatcaccaaccggcagcaggtgttcgacatcggaatcgccaagtacaacgagacg
tgccgcagcatcgtcaccaagtacgtctccgagtgggaggccgtcgtcacgcgcacgggg
aggtggattgacttcaagaatgactacaagaccatggacatcaacttcatggagagcgtg
tggtgggtctttgcacagctctggcagaaggacctcgtctacaagggcttcaaggtgatg
ccttacagcacaggctgcaaaactgcactgtcaaactttgaggcagcactggactatagg
actgttcctgacccagcggtgatggtatccttccctattgctggtgatgcggacaatgca
gctcttgttgcatggactacaacaccctggacacttccaagtaacctagcattatgtgtc
aatgccaacctcacatatgcaaaggttaaggacaagtcaactgcagcagtatatattgtt
gcggagtctaggcttgggcaattgccagttaaggtcaaagcttcaggaaagaagcaagca
ccttcaaagggaagcaatgctgaagctgttcaagatggtttggataaggaatcatatgag
ctgttggcaaagattcctgggtcatccttggttggcttaaaatatactcctctatttgat
tttttcatggaacttcaagagactgcctttagagtgattgcggataactatgtcactgat
gatagtggaactggtgttgtccattgtgctcctgcttttggtgaagacgaccatcgtgtt
tgccttgctgctgggatatttgagactgctgggcttgttgtcgctgttgatgatgatggg
tgttttattgaaaagattactgattttaaagggcgatatgtcaaagaagccgataaggac
atcattaatgctgccaaggataaaggaagacttgttagtaaagggagcattgagcactct
tatccattttgttggcgctcgggtactcctcttatctatcgggctgttccaagctggttt
gtcaaggttgagaaaattaaggaccagttgctggaatgtactaaggagacctactgggtg
cctgagtatgttaaggaaaaaagatttcacaactggcttgaaggggctcgtgattgggct
gttagcagaactagattctggggcactccacttccactgtggatgagtcaagatggtgaa
gaaattgttgttatggattccatcgagaaacttgaaaaattatctggagtaaaggttact
gatcttcaccgacactatgttgacgatattacaattccctctaagagaggacccgagttt
ggggtgctcaaacgtgttgacgatgttttcgactgctggttcgagagtggatcaatgcca
tatgcctacattcattatccttttgagaataaggagctatttgaaaagaactttcctggc
aattttgttgcagagggtttagaccaaacacgtggatggttctatactctgatggtgctc
tcaacagcactgtttgggaagcctgcatttaagaatcttatatgcaatggtcttgtcttg
gctgaggatggtaagaaaatgagcaagagtaagaagaattatccttcacccacagatctc
atcgatgagtatggagcggatgctttgcgactatatttgataaattcgccggttgtacgt
gcagagtctctacgattcaaacgtagtggtgtttacagtgttgtgaaagatgtcttcctc
ccgtggtataatgcttacagattctttgttcaaaatgcaaagagacttgaagttgagggt
cttgctgtattttctccaatcgatcaagcgtcacttctgaagtcatccaatgtgttagac
cactggataaactctgcaactgaaagtctagtcagctttgttcaacaggaaatggatgca
tatcggctttacacggttgtgccatatttggtaaaatacatcgacaatcttactaacatc
tatgtgcgattaaatcgcaaacggttaaagggacgtactggagaagaagactgcagaatt
tctctttcaacgctatactatgctcttgttacaacttgcgtggcgatggctccatttaca
ccattctttactgaagttctctatcaaaatctacggaaggtgtcaaataaatctgaggag
agcattcatttctgcaagtttccttccacaactggggagagagatgagcgtgttgaacaa
agtgtgaataggatgatgaccatcattgatcttgcacgtaatattcgtgagcggcataac
aaagctctcaaaacaccactcaaggagatggtggttgtgcatccggacaatgaattcctt
gaagacatcacggggaaactgaaagagtatgtcatggaagaaatcaatgttaagactgtc
actccatgtaatgatcccttagtgtatgcttctctgcgggccgaacctaatttcagtgtg
ctaggcaaaagacttggaaaagacatgggcaaagtatcaaatgaggtgaagaagatgaca
caagaacatgtcttagcctttgaggaaagaggggaggttacattctttggtcattgcttg
aagcaagatgatattaaggtggtccggcaattcaagcgtcctgaaaatgtgtcagagaag
gagattgatgctgcaggagacggtgacgttttagtcattttagatctacgagctgatcaa
tcattgtttgaagctggagttgctcgagaggttgtgaacaggatccaaaagttacggaag
actgctcagcttgaaccttctgatccagttgatgtatattacaaatctgtggaccatgac
aaaaatacgctgggagagattttgaattcacaggatcggtatattagggacgcacttggt
tcgccactcattccgaaggaaatggcaccaacggatgtggtgttacttgctgaggagtct
catgatgtacatgatatgtcatttgtcatatgcattgcaaggtcatgccctgttctttcg
ccagatcttcttgctcatgcctcaggcaacaacgaccatgtggaggcgttgagagtacat
cttttgtcaagatctctttccagattgaagaaccagttccaagcaggaaatggcatgatt
acggttgactgcattgaaggttacccgccaatcaatctacaactaggaaaacatattttc
ctcagtgcaggggatttctatctggctagccgatcctga
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integrated database retrieval system
