Panicum hallii (Hall's panicgrass): 112891896
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Entry
112891896 CDS
T07366
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112891896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112891896
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112891896
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112891896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CHY
zinc_ribbon_6
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112891896
NCBI-ProteinID:
XP_025814681
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All DBs
Position
5:10835672..10840806
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AA seq
343 aa
AA seq
DB search
MFGIAFIYCDAWSSAVYGIPELYLCCVCNVIAFSGKKKTVKMGALDLHLESASAQHGQAK
LNVEEYTKGSLESGGNYKKKKINGSDPDDFEKTEKGIMQYGCPHYRRRCRIRAPCCNEIF
DCRHCHNEVKNSIKVDTMRRHELPRQEVQQVICSLCGTEQEVRQVCINCGVCMGKYFCGL
CKLFDDDVSKQQYHCNGCGICRIGGRENFFHCSKCGCCYSIVLKNSHACVEGAMHHDCPI
CFEYLFESTNDVSVLPCGHTIHVKCLKEMEEHCQFACPLCSKSVCDMSKAWERLDMELAT
LSDSCDDKMVRILCNDCGAISEVQFHLIAHKCQNCKSYNTRQI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcattgctttcatctattgtgatgcctggtcttcggcagtatatggcattcca
gaactgtatttgtgttgtgtttgcaacgtgatagctttcagcggtaaaaaaaaaacagtc
aagatgggcgcattggacctacaccttgagtctgcttctgctcaacatggacaagccaag
ctaaatgtggaggaatacaccaagggctctttggagtctggtggaaattacaaaaaaaag
aagatcaacggttcagatcctgatgattttgagaaaactgaaaaaggaataatgcagtat
gggtgtccacattacagaaggagatgccgcatacgagctccttgctgcaatgagattttt
gattgccggcactgccacaatgaagttaagaattccattaaagtcgatacaatgaggagg
catgaacttccacgccaggaagtacagcaggttatatgctcattatgtggcactgaacaa
gaggtacgacaagtatgcatcaattgtggagtatgcatgggaaagtacttctgtggattg
tgcaagctctttgacgatgatgtttctaaacaacagtatcactgcaatggatgtggaata
tgtagaattggagggagggaaaatttcttccactgctcaaaatgtggatgttgttattca
attgtgctgaagaacagtcatgcatgtgttgaaggagcaatgcatcatgactgtccaatc
tgctttgagtacttgtttgagtcgacaaatgatgtttctgtcctgccttgtggtcatacc
attcatgtcaagtgcttgaaagaaatggaggaacactgccagtttgcatgcccactttgc
tccaagtcagtttgtgacatgtccaaggcgtgggagagactcgacatggagctggcgact
ctgtccgattcttgtgatgacaagatggtccgcatattatgcaacgactgcggggcgata
tcagaggtgcagttccatttgatcgcgcacaagtgccagaattgcaagtcatacaacacc
cgccagatctga
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