KEGG   Panicum hallii (Hall's panicgrass): 112893014
Entry
112893014         CDS       T07366                                 
Name
(RefSeq) RING-box protein 1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03420  Nucleotide excision repair
phai04120  Ubiquitin mediated proteolysis
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112893014
   04120 Ubiquitin mediated proteolysis
    112893014
  09124 Replication and repair
   03420 Nucleotide excision repair
    112893014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112893014
   03400 DNA repair and recombination proteins [BR:phai03400]
    112893014
Enzymes [BR:phai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     112893014
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   112893014
  Multi subunit type E3
   SCF complex
    Ring finger protein
     112893014
   Cul2 complex
     112893014
   Cul3 complex
     112893014
   Cul4 complex
     112893014
   Cul7 complex
     112893014
   Cul8 complex
     112893014
   Cul9 complex
     112893014
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112893014
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112893014
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 112893014
NCBI-ProteinID: XP_025815934
LinkDB
Position
5:53079217..53081695
AA seq 126 aa
MSAMETDINAPPPPAPAPAGEGSSAAGPSSSSSRKPNKRFEIKKWNAVALWAWDIVVDNC
AICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
FQKYGH
NT seq 381 nt   +upstreamnt  +downstreamnt
atgtccgccatggagaccgacatcaacgcgccgccgccgcccgcccccgcccccgccggc
gagggctcctccgcggccggcccgtcctcatcctcctcccgcaagcccaacaagcgcttc
gagatcaagaagtggaacgccgtcgcgctctgggcatgggatatcgtcgtcgataactgc
gccatctgccgcaaccacatcatggatctatgcatcgagtgccaggcaaaccaggccagc
gccaccagcgaggagtgcactgtcgcttggggtgtctgtaatcatgcttttcacttccac
tgcatcagcaggtggcttaagactcgccaagtgtgcccattagacaacagtgagtgggag
ttccagaaatatggccactag

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