Panicum hallii (Hall's panicgrass): 112893014
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Entry
112893014 CDS
T07366
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03420
Nucleotide excision repair
phai04120
Ubiquitin mediated proteolysis
phai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112893014
04120 Ubiquitin mediated proteolysis
112893014
09124 Replication and repair
03420 Nucleotide excision repair
112893014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112893014
03400 DNA repair and recombination proteins [BR:
phai03400
]
112893014
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
112893014
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112893014
Multi subunit type E3
SCF complex
Ring finger protein
112893014
Cul2 complex
112893014
Cul3 complex
112893014
Cul4 complex
112893014
Cul7 complex
112893014
Cul8 complex
112893014
Cul9 complex
112893014
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112893014
TCR (transcription coupled repair) factors
Cul4-CSA complex
112893014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112893014
NCBI-ProteinID:
XP_025815934
LinkDB
All DBs
Position
5:53079217..53081695
Genome browser
AA seq
126 aa
AA seq
DB search
MSAMETDINAPPPPAPAPAGEGSSAAGPSSSSSRKPNKRFEIKKWNAVALWAWDIVVDNC
AICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
FQKYGH
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccatggagaccgacatcaacgcgccgccgccgcccgcccccgcccccgccggc
gagggctcctccgcggccggcccgtcctcatcctcctcccgcaagcccaacaagcgcttc
gagatcaagaagtggaacgccgtcgcgctctgggcatgggatatcgtcgtcgataactgc
gccatctgccgcaaccacatcatggatctatgcatcgagtgccaggcaaaccaggccagc
gccaccagcgaggagtgcactgtcgcttggggtgtctgtaatcatgcttttcacttccac
tgcatcagcaggtggcttaagactcgccaagtgtgcccattagacaacagtgagtgggag
ttccagaaatatggccactag
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