Panicum hallii (Hall's panicgrass): 112895026
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Entry
112895026 CDS
T07366
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00906
Carotenoid biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M01040
Lutein biosynthesis, plants, lycopene => lutein
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112895026
Enzymes [BR:
phai01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
112895026
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Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
Thi4
FAD_binding_2
Pyr_redox_3
FAD_binding_3
Motif
Other DBs
NCBI-GeneID:
112895026
NCBI-ProteinID:
XP_025818674
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Position
5:complement(17504306..17508269)
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AA seq
535 aa
AA seq
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MGLSGAAISAPLGCRGLPRSAFGGGGKARGAEAERWRRAGAGRRSGGAKVRCVATEKHDE
TAAAVGVEFADEEDYRKGGGGEMLYVQMQATKPMESQSKIASKLLPISDEDSVLDLVIIG
CGPAGLSLASESAKKGLTVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWKDTIVYLD
NNKPILIGRSYGRVHRDLLHEELLRRCYEAGVTYLNSKVDKIIESPDGHRVVCCERGREI
LCRLAIVASGAASGRLLEYEVGGPPVCVQTAYGVEVEVENNPYDPSLMVFMDYRDCFQEK
FSHSEQENPTFLYAMPMSSTRVFFEETCLASKDAVPFDVLKKRLMYRLDAMGVRILKVHE
EEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISNILRNRVP
AQYLPGNSQNYSPSMLAWRTLWPQERKRQRSFFLFGLALIIQLNNEGIQTFFEAFFRVPK
WMWQGFLGSTLSSVDLILFSFYMFAIAPNQLRMNLVRHLLSDPTGSTMIKTYLTL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggggctctcgggcgcggcgatctccgcgccgctcggatgccgcgggctgccgcgcagc
gcgttcggcggaggcggcaaggcgcggggggcggaggcggagaggtggcggcgggcgggc
gcgggacggcgctcgggcggggcgaaggtgaggtgcgtggcgaccgagaagcacgacgag
acggcggcggcggtcggcgtggagttcgcggacgaggaggactaccgcaagggcggcggc
ggcgagatgctctacgtgcaaatgcaggccaccaagcccatggaaagccagtccaagatc
gcctccaagctgctgcccatatccgatgaagattcagtactcgatttggttatcattggc
tgtggtcctgccggtctttctctagcttcagagtcagccaagaaagggctcactgttggt
cttattggccctgaccttccattcacgaacaactatggtgtgtgggaggatgaattcaaa
gatcttggtctagagagctgtatcgagcatgtctggaaggatactattgtctacctagac
aataacaaaccaatactgattggccgttcttatggcagggtgcaccgtgacctgctgcat
gaggagttgctgagaagatgttatgaagctggcgttacatacctcaactcaaaagtggac
aagatcattgaatctccagatggtcatagagtagtctgttgtgaaaggggccgtgagata
ctctgcaggcttgccattgttgcttcgggggcagcatctggtaggcttctggagtacgag
gttggaggtccccctgtctgtgtacagactgcatatggagtagaagttgaggtggaaaac
aatccatatgatcccagcttaatggttttcatggactacagagattgtttccaagagaaa
ttctcacactctgaacaagaaaatccaactttcctgtatgctatgcctatgtcgtccacg
cgagttttctttgaggaaacatgtttagcctctaaagatgcggtgccctttgatgtactt
aagaagagattaatgtatcgattggatgcgatgggagttcgaatccttaaagttcacgag
gaggaatggtcctacattcctgttggagggtccttaccgaatacagatcagaaaaatctt
gcatttggtgctgcagcaagtatggtgcatcctgcaactgggtactcagtggtcagatct
ttatctgaggctccaagatatgcctctgtaatatccaatatcttaaggaaccgagttcct
gcacaatatttgccaggaaattctcaaaattacagcccatcaatgctcgcatggagaaca
ctatggccccaagaaaggaaacgtcaacgatccttcttccttttcggattggcattgata
atccaactgaataatgaaggcatacaaacattcttcgaagcctttttcagggtgccgaaa
tggatgtggcaagggttcttgggctcaaccctttcatcggtggacctaatactgttttca
ttctacatgtttgccatagctccgaatcagttgcgaatgaacctcgtcagacatctcctc
tctgacccgacaggctcaacaatgatcaagacctacctgaccttgtaa
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