KEGG   Panicum hallii (Hall's panicgrass): 112897167
Entry
112897167         CDS       T07366                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112897167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112897167
Spliceosome [BR:phai03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112897167
 Complex B
    112897167
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    112897167
SSDB
Motif
Pfam: SMN_Tudor TUDOR Agenet RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 112897167
NCBI-ProteinID: XP_025821175
LinkDB
Position
6:complement(550422..554636)
AA seq 297 aa
MEDLSVEELASNLSTYKDQLREVKKLIKEKKDDPGISEYLDMEKELQEVIMLTEELLATA
KQTESAQNVAGLSPPNYSAGVQSEGLDDLSHSHKFAVGSRVQAVWSEDGEWYNATVEALT
PNGYYVAYDGWGNSEEVDPDNVRPLEEEAADALRQAEKEAEATKMAIKRKIEQAATSDFQ
ARSLPSKLRIEPSDPEDVKAAKRKKIHAFKSKARFEQLEFAQNKRQNAWQQFQTTKGKAK
KVGFFSGRKKESIFKSPDDHRGKVGVTGSGKGLTDFQRREKHLHLKGGSADAVDDEE
NT seq 894 nt   +upstreamnt  +downstreamnt
atggaggatctgagtgtggaggagctcgcctccaacctctccacctacaaggaccagctc
cgcgaggttaagaagcttatcaaggagaaaaaggatgaccctggaatttctgaatatctt
gatatggagaaagagcttcaggaggtcattatgttaactgaagagcttttggcaactgca
aagcaaaccgagagtgcccagaatgttgcaggtctatcaccaccgaattattcggctgga
gtgcagtcagagggactggatgacctttcacattcccataagtttgcggttgggtctaga
gtgcaagctgtgtggagtgaagatggggaatggtataatgcaacagttgaagctttgaca
ccaaatggatattatgtagcttacgatggctggggaaacagtgaagaggtagacccagat
aatgtgaggccgcttgaggaagaagcggcggatgctttgcgacaagctgaaaaggaagct
gaagccacaaaaatggcaataaagaggaaaattgaacaagctgcaacatctgattttcaa
gcgcgcagcttgccttccaaacttcgtatcgaaccaagtgatcctgaggatgtgaaagct
gcgaagcgtaagaaaatacatgctttcaaatcaaaagcccggtttgagcagcttgagttt
gcacaaaataagcggcagaatgcatggcagcagtttcaaacgaccaagggtaaagctaaa
aaggtggggttcttctcaggccgcaagaaggagagcatcttcaagtcaccggacgaccac
agaggtaaggtgggtgtcaccggtagcggcaaaggcctgactgatttccagaggagggag
aagcatctgcacctcaagggcggctccgcggacgcagtggatgacgaggaatag

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