Panicum hallii (Hall's panicgrass): 112897964
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Entry
112897964 CDS
T07366
Name
(RefSeq) probable 4-coumarate--CoA ligase 5
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00130
Ubiquinone and other terpenoid-quinone biosynthesis
phai00940
Phenylpropanoid biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
phai_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
112897964
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
112897964
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
112897964
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112897964
NCBI-ProteinID:
XP_025822158
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Position
6:complement(39141766..39144232)
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AA seq
543 aa
AA seq
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MGSLTTEPPAETVFRSTLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGEVLTFGDV
DRLSRRVAVGMRAALGVRPGGTVMLLLPNSVEFALAFLACSRLGAATTTANPLHTPPEIA
KQAAASGATIVVTEPAFVAKVRGLAGVAVVATGDGAEGCVSFADLAAAHDEPAAPPEEAA
IDVVNDVVALPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHLREDDVVLCVLPMF
HVYSLHSILLCGMRAGAALVIMKRFDTARMFELVERHGVTIAPLVPPIVVEMAKSDAIDR
HDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVK
SGACGTVVRNAELKIIDPETGLSLPRNQPGEICIRGKQIMKGYLNNPEATAKTIDAEGWL
HTGDIGYVDDDEEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPGIADAAVVPMKDDSCG
EIPVAFVVASDGFDITEDEIKQYVAKQVVFYKRLHKIFFVETIPKAPSGKILRKDLRAKL
AAC
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgctgacgacggagccgccggccgagacggtgttccgctcgacgctcccggac
atcgccatcccggaccacctcccgctccacgactacgtcttcgagcgcctggccgaccgc
cgcgaccgcgcctgcctcatcgacggggccacgggggaggtgctcacgttcggcgacgtg
gaccgcctgtcgcgccgcgtggcggtggggatgcgcgccgcgctcggcgtgcgccccggc
ggcacggtgatgctgctgctccccaactccgtcgagttcgcgctggcgttcctcgcatgc
tcccgcctcggcgccgccaccaccacggccaacccgctccacaccccgcccgagatcgcc
aagcaggccgccgcctccggcgccaccatcgtcgtcaccgagccggcgttcgtcgccaag
gtgcgcgggctcgccggcgtcgccgtcgtcgccacgggcgacggcgccgaggggtgcgtc
tcgttcgccgacctcgccgccgcccacgacgaaccggcggcgccgccggaggaggcggct
atcgacgtggtgaacgacgtggtcgcgctgccgtactcgtccggcacgacggggctgccc
aagggggtcatgctgtcgcaccgcgggctggtgaccagcgtggcgcagctcgtcgacggc
gacaacccgaacctccacctccgggaggacgacgtcgtcctctgcgtcctgcccatgttc
cacgtgtactcgctgcactccatcctcctctgcgggatgcgcgccggcgcggcgctcgtg
atcatgaagcgcttcgacaccgcccggatgttcgagctcgtggagcggcacggcgtcacg
atcgcgccgctcgtgccgcccatcgtggtggagatggccaagagcgacgccatcgaccgc
cacgacctctcctcggtgcgcatggtcatctccggcgccgcgcccatgggcaaggagctg
caggacctcctgcgcgctaagctccctcgcgccgtgctcggacagggctatgggatgaca
gaggcagggccggtgctctcgatgtgcatggcatttgccaaggagcccttgccggtgaag
tccggcgcctgcggcacggtggtgaggaacgccgagctcaagatcatcgacccggagacc
ggcctgtccctcccccgcaaccagcccggggagatttgcatcaggggcaagcagataatg
aaagggtacctgaacaacccggaagccacggcgaagaccatcgacgcggaggggtggctg
cacaccggcgacattgggtacgtcgacgacgacgaggagatcttcatcgtggaccggctc
aaggagctcatcaagtacaaggggttccaggtcgcccccgcggagctcgaggccatgctc
atcgcgcaccccggcatcgccgacgccgccgtcgtcccgatgaaggatgactcctgcggc
gagatcccggtggcgttcgtcgtggcgtccgacggcttcgacatcaccgaggacgagatc
aagcagtacgtggcaaaacaggttgtgttctacaagaggctgcacaagattttctttgtg
gagactatcccgaaggcgccatctggcaaaattttgaggaaggacctgagagccaagttg
gcggcgtgctga
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