Panicum hallii (Hall's panicgrass): 112900116
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Entry
112900116 CDS
T07366
Name
(RefSeq) putative lipoxygenase 5 isoform X1
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00591
Linoleic acid metabolism
phai00592
alpha-Linolenic acid metabolism
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
112900116
00592 alpha-Linolenic acid metabolism
112900116
Enzymes [BR:
phai01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
112900116
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
112900116
NCBI-ProteinID:
XP_025824642
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All DBs
Position
7:36283081..36287550
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AA seq
925 aa
AA seq
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MTPAAMEMLGRSFLPGPAGAGAVGRERGGGPCLAAVGREGRRRRRGPLRSAAPVGALAER
VVVTPAPAERAGAAPPEELPHPQSVAARAVVTVRRRRKEDAKRRVAEQLDAYADRVGRSV
LLELVSTETDPTGKGGPKKSKRSALVGWFEKKDVKAERVVYTADFTVDASFGEPGAVTVL
NRHQREFFIESIVVEGFPSGPAHFTCNSWVQPTRVDRSPRVFFTNKPYLPDETPPGLQEL
RRQELSDLRGEGAAAGAADSERRLTDRVWEYDVYNDLGNPDKGAEFARPVLGGEQLPYPR
RMRTGRPKTVTDDRAESRVEYPEPIYVSRDEEFEEGKNEMLSEGALKALLHNFMPLLVSS
VSPDIRDFAGFHDVDNLFKEGLRLKQALQDQLFQKIPFVRKIQENSEGLLRYDTPDIIKK
DKFAWLRDDEFARQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGQLDGM
SVREALEDNRLYMLDYHDIFLPFLDRINAQDGRKAYGTRTLFFLTAAGTLKPIAIELCLP
PMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAA
HRQLSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGRYCMEMSAFAYREL
WRIDQEGLPADLIRRGMAVEDPTQPHGLRLLIEDYPYATDGLLLWSAITRWCDAYVAMYY
PSDESVQVDAELQAWYGEAVRTGHADKRDAPWWPRLSTPADLASLLTTLVWLTSAQHAAL
NFGQYPLGGYIPNRPPLMRRLVPAEGDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDT
LSTHSADEEYLGERTDEAWTADPAALAAAREFADEVRRAEEEIERRNADTGRRNRCGAGV
LPYELMAPTSGPGITCRGVPNSVTI
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggcggcgatggagatgctggggagatccttcttgccgggccctgcgggcgcc
ggcgcggtgggccgggagcggggaggcgggccctgcctcgccgcggtcgggcgggagggg
aggaggaggaggagggggccgttgcggtcggcggcgccggtgggggcgctggccgagcgg
gtcgtcgtgacgccggcgccggcggagagggccggggcggccccgccggaggagctgccg
cacccgcagagcgttgcggcgcgggccgtggtgaccgtgcggcggaggcgcaaggaggac
gccaagcgccgggtcgctgagcagctggacgcctacgccgacagggtcggccggagcgtc
ctcctcgagctcgtcagcacggagaccgacccaacagggaaagggggccccaagaagagc
aagcgatcggcgctggtggggtggttcgagaagaaggacgtcaaggcggagcgggtggtg
tacacggcggacttcactgtcgacgcgtccttcggcgagcccggcgcggtgaccgtgctc
aaccggcaccagcgggagttcttcatcgagagcatcgtcgtcgagggcttcccctccggc
cccgcgcatttcacctgcaactcgtgggtccagcccacccgcgtggaccgcagcccgcgc
gtgttcttcaccaacaagccgtacctgccggacgagacgccgccggggctgcaggagctc
cggcggcaggagctcagcgacctgaggggcgagggcgccgccgccggcgccgcggacagc
gagcgcaggctcaccgaccgggtgtgggagtacgacgtgtacaacgacctcgggaacccg
gacaagggcgccgagttcgcgcgccccgtcctcggcggcgagcagctgccgtacccgcgc
cggatgcggactggccggcccaagaccgtcacagacgaccgcgcggagagcagggtggag
tacccggagcccatctacgtgtcccgggacgaggagttcgaggagggcaagaacgagatg
ctgtcggagggcgcgctcaaggcgctgctccacaacttcatgccgctgctggtgagctcc
gtgtcgccggacatccgcgacttcgccggcttccacgacgtcgacaacctcttcaaggag
gggctccggctgaagcaggcgctgcaggatcagctgttccagaagatccccttcgtgcgc
aagatccaggagaacagcgagggcctcctccgctacgacacccccgacatcatcaagaag
gacaagttcgcgtggctgcgcgacgacgagttcgcgaggcaggcgctggctggcatcaac
cccgtcaacatcgagcgtcttcaggcgttcccgccggtgagcaagctggatccggccgtg
tacggcccgccggagtcggccatcaccgaggagcacatcatcggccagctcgacggcatg
tcggtgcgggaggcgctggaggacaaccggctgtacatgctggactaccacgacatcttc
ctgccgttcctggaccggatcaacgcgcaggacgggcgcaaggcctacggcacgcgcacg
ctcttcttcctgacggccgcgggcacgctcaagcccatcgcgatcgagctctgcctgccg
cccatgacggacggctgcaagcgcgccaagcgggtgttcacgccgcccgccgacgccacc
agcaactggctctggcagctcgccaaggcgcacgtctgctccaacgacgccggcgtccac
cagctcatcaaccactggctgaggacgcacgcgtgcatggagccgttcatcatcgcggcg
caccggcagctgagtgcgatgcaccccatcttcaagctgctcaagccgcacatgcggtac
acgctcaagatcaacgcgctggcgcggcagatcctcatcaacggcgacggcgtcatcgag
tccggcttcacccccggccgctactgcatggaaatgagcgccttcgcctaccgggagctc
tggcggatcgaccaggagggcctccccgccgatctcatcagaagaggcatggccgttgag
gacccgacccagccgcacggcctccggctgctcatcgaggactacccgtacgccaccgac
gggctgctgctctggtcggccatcacgcggtggtgcgacgcctacgtcgccatgtactac
ccgtccgacgagtccgtgcaggtcgacgcggagctgcaggcctggtacggcgaggccgtg
cggacggggcacgcggacaagcgcgacgcgccgtggtggccgcgcctgtcgacgccggcg
gacctggcgtcgctgctcacgacgctggtgtggctgacctcggcgcagcacgcggcgctc
aacttcgggcagtacccgctgggcgggtacatcccgaaccggccgccgctgatgcggcgg
ttggtgcccgccgagggcgacccggagtacgcgcacctggtggcggacccgcaccgcttc
ttcctgtcggcgctgcccagcctgacacagaccaccacgttcatgaccgtcatcgacacg
ctgtccacgcactccgccgacgaggagtacctcggggagcgcaccgacgaggcgtggacg
gccgacccagccgcgctcgcggcggcgcgcgagttcgcggacgaggtgaggcgcgccgag
gaggagatcgagcggcgcaacgccgacacgggccggcgcaaccggtgcggcgccggcgtg
ctgccgtacgagctcatggcgcccacgtccggaccggggatcacctgccgcggcgtcccc
aacagcgtgaccatttag
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