Parasphingorhabdus halotolerans: HF685_02225
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Entry
HF685_02225 CDS
T07423
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao01501
beta-Lactam resistance
phao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF685_02225
01503 Cationic antimicrobial peptide (CAMP) resistance
HF685_02225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phao02000
]
HF685_02225
01504 Antimicrobial resistance genes [BR:
phao01504
]
HF685_02225
Transporters [BR:
phao02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HF685_02225
Antimicrobial resistance genes [BR:
phao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HF685_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
MtrF
Motif
Other DBs
NCBI-ProteinID:
QJB68262
UniProt:
A0A6H2DHW6
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All DBs
Position
471901..475017
Genome browser
AA seq
1038 aa
AA seq
DB search
MILSDVSVKRPVFAVVLSLLLVLAGIIAFLQLPVRQYPAIEPPIVSVDVNYPGAAANVVE
SRITQILEDRIAGVEGIEMIRSSSRDGRSDITVEFAPDRDVDAAANDIRDRVSGALDNLP
EESDPPEINKVDADARPFMWLNLTGEGRDSLWLADYADRVLTDRFSSIDGVARVQAGGAA
RPAIRIWLDRKSMAAFGLSPNDVEAALRRENVELPAGRVESSDLNLTVRVARAYGGVDDF
KALVIRRSADGSFLRLADVARVELGPENVYNHFRSNGLPGVGMGIIRQSGANELQVANDI
KDRIEEIKPLLPSGVQLAVSYDSSVFIDKAIENVWETLVFAAFLVIAVIYLFLGSVRATL
IPAVTVPISLMGTFFVLWLLGLSINLLTLLALVMAIGLVVDDAIVVLENIYARIERGESR
LVSAFEGARQVGFAVVATTAVVIAVFVPVMFLPGETGLLFRELAITMIVAVSISTFVALT
LIPVMCSKILKKGGGETSMSRFVDEKFQQTSIRYESVLSRWIRRPFLLGGIAFGMAAIFA
AIGLTTLKSEVAPPEDTGFIFGNASIAEGAGWPRLVKVMNDLETIVLPMTEDDGPLRRIL
FRAPASFGPSGDFSSGRIIMFLKPWDERDMTTAETVAEVNKRFRDYPAAQVFASGGSTIG
GRGGEAIRFVIAGDTYDELTRARDALFVAAGEYPGIETLESDYKETRPQVVVNVNTVRAA
DLGVSVQEIGRTLESMMGSRNAGTYVDRGEEYDVIMQAEPEDRVTAADLTNVYVRGRDDT
LVPLSGLVTLDSRAEAGELNRFNKLRAITLEGTVAPDYSLGEALTFLETEAASLPEVVAI
GYEGESRALRQTGGSIWLVLGFTIILVYLVLAAQFESFVSPLIIILGVPLAVSGGLLGLT
AMGGTLNLYSQIGLIMLVGLAAKNGILIVEFANQLRDEGLEFERAILESAKRRFRPVLMT
SIATVAGATPLMLATGAGGASREAIGIVVVWGVSISTLLTLVVIPSFYYLLARNTGSPLA
VTRRLRIQREGRGVSTNA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
ttgattctctctgacgtctcggtcaagcgccctgtgtttgcagtcgtgcttagcctgttg
cttgtgctcgcagggataatcgcttttcttcaactacccgttcgccaataccccgccatt
gaaccgccaattgtttcggtcgatgtaaactatcccggtgctgcggcaaatgttgttgaa
tcccgaataacccagatacttgaagaccgcattgccggggttgaaggcatcgaaatgatc
cgctcttcatctcgtgatgggcggtcggatattacggttgagtttgcgcccgaccgggac
gtcgatgcagcagccaatgatattcgcgaccgtgtttcgggtgcgcttgataatctgccc
gaagaatcggacccacccgaaattaacaaggttgatgcagatgcccgaccgttcatgtgg
ctaaatcttaccggtgaaggccgggattccctctggctggcagattatgctgatcgtgta
ttgaccgaccggttttcatcaatcgatggcgtggcgagggttcaggctggtggggcggca
cgaccagcaatccggatttggctcgaccgcaaatcaatggccgctttcggtctgtctccg
aatgatgttgaagcagcgctgcgccgcgagaatgtcgaacttcccgctggccgcgtcgaa
tcatcggacctcaatctcaccgtgcgggtggcgagagcctatggcggtgtcgatgatttc
aaggcgctggtcatccgccggagcgcggacggatcattcttgcggctcgccgatgtcgca
agagtcgaactgggaccggaaaatgtttacaaccattttcgttcgaacgggcttcccggc
gtcgggatggggattatccggcaatcgggcgccaatgaactgcaagttgccaatgatatc
aaggaccggattgaagagataaagccgctattgccttctggtgttcaattggcggtcagc
tatgacagcagcgtcttcattgacaaggcgattgaaaatgtttgggaaacgctagtcttt
gccgcgtttctggtgatcgccgtcatctaccttttcctcgggtcggtgcgtgccaccctt
attccggctgtcaccgttccgatttcgcttatgggaacattttttgttctgtggctcctt
ggactttcgatcaatttgctgacgttgctggcactggtgatggcaatcggcctagttgtt
gatgatgcgattgtggtgctggaaaatatctacgcgcggattgaacgcggcgaaagccgc
ctagtctcagccttcgaaggtgcccgtcaagtcggtttcgccgttgttgcaaccaccgcc
gttgttatcgctgtttttgttccggtgatgtttttgcccggtgaaaccggtctgttgttc
cgtgaactggcgattaccatgatcgttgcggtatcaatctcgacctttgtggcgcttacg
ctaattccggtcatgtgttcgaaaatcctcaaaaaaggcggcggcgaaacctcgatgagc
cgctttgttgacgaaaagtttcagcagactagcatcaggtatgaaagcgttttatcccgc
tggatccgcaggccatttctgctcggcggaatagcgttcgggatggccgcaattttcgca
gccatcgggctgacgacgctcaagtccgaagtggccccacccgaagacaccggatttata
ttcggcaacgcatcaattgcggaaggtgctggttggccccggctggttaaggtcatgaat
gaccttgaaaccatcgtgttgcctatgacagaagatgacggcccgctgcggcgaatttta
tttcgtgcacccgcttcctttggcccgtcaggcgatttttcgtcgggccgcatcatcatg
tttctcaaaccttgggacgaacgggacatgacgaccgcagaaaccgttgccgaggtaaac
aagcgctttcgcgattatccggccgcgcaggtttttgcatctggcgggtcgacgatcggc
ggcagaggcggcgaagcgatccgctttgttattgcaggggatacctatgatgaattgacc
cgcgcgcgcgatgcgctgtttgttgctgctggcgagtacccgggtatcgagacactggag
tccgattacaaggaaacccggccgcaggtcgtcgttaacgtcaacacggtgcgggccgcc
gatctcggagtgtccgttcaggaaatcgggcggacccttgaatcgatgatgggctcgcgc
aatgcaggtacctatgtcgatcggggtgaggaatatgacgtaatcatgcaggctgagccg
gaagaccgggtgaccgccgccgatcttaccaatgtctatgtccgtggccgtgatgatacg
ctggttccgttgtcgggtctggttacgctggatagcagggccgaggccggtgaactgaac
cgttttaacaaactccgcgccatcaccctcgaagggacggttgcaccggactattccctt
ggcgaagcactgactttcctcgaaacggaagcggcatcgctgccggaggtggttgctatt
ggttatgaaggagaaagccgggcgctgcgtcaaaccggcggttcgatctggctggttctc
ggttttaccattatccttgtttatctggtgctcgccgcccagtttgagagtttcgtcagt
ccgctgatcatcattctgggtgttcctcttgcggtaagcggaggcctgcttggtctcaca
gcaatgggcggaacgctcaatctctacagccaaatcgggttgatcatgctggtcggactt
gccgcaaagaacggtatcctgatcgtcgagtttgccaaccagttgcgtgatgaaggtttg
gaatttgaaagagcaatcctagaatctgcgaagcgccgtttccgcccggtacttatgact
tcgattgccactgttgccggcgcgacgcctttgatgctggctaccggagcgggtggagcc
agccgtgaagcgatcggaatcgtggtggtctggggcgtcagcatttccacgttgctcacg
ctggtggtaattccgtcattctattatctgctggcccgaaataccggaagtccgcttgcc
gtgacgcgccgtcttagaattcaaagggaaggcagaggagtgtcaaccaacgcatga
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