Peptoniphilus harei: NCTC13077_00787
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Entry
NCTC13077_00787 CDS
T05838
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
phar
Peptoniphilus harei
Pathway
phar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13077_00787 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phar03400
]
NCTC13077_00787 (nth)
Enzymes [BR:
phar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC13077_00787 (nth)
DNA repair and recombination proteins [BR:
phar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC13077_00787 (nth)
Prokaryotic type
NCTC13077_00787 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
VEJ34048
LinkDB
All DBs
Position
1:826103..826741
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AA seq
212 aa
AA seq
DB search
MKGILSHEEADKCLDVLEETYPDAKCELEHTSPFELLVATILSAQCTDVRVNKVTGEMFK
KYNKPEDFANMDIKILEGLVKECGLYRNKAKNIKASSNVILEEFNGEVPETIKDLMKLPG
VGKKTANVVASTCFGVPAIAVDTHVFRVSNRIGFVNENNVEKTEKALQNKIDKDRWTKAH
HLFIFHGRRCCTARSPKCQECTIKDFCRYYEG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaattttaagtcacgaagaggcagacaagtgccttgatgtcttagaagaaact
tatccagatgccaagtgtgagcttgaacacactagtccctttgagcttttagttgcaact
atcctatcagctcaatgtactgatgtgagagtcaacaaggttactggagaaatgtttaaa
aaatataataagccagaagactttgccaatatggatataaaaatcttagaaggtcttgta
aaagaatgtggcctatataggaacaaggctaagaatattaaagcatcttcaaatgtaatc
ttggaagaatttaatggtgaagttccagaaaccattaaggacctaatgaagttaccaggg
gttggaaagaagacagccaatgtcgttgcctcaacttgctttggagtgcctgccatagca
gttgatacccatgtctttagggtttcaaataggataggatttgtaaatgaaaacaatgta
gagaaaacagaaaaggctctgcaaaataaaattgataaagacaggtggaccaaggcccat
cacttatttatatttcatggaagaagatgctgcactgcaagaagtccaaagtgccaagag
tgcactatcaaagacttttgtaggtattatgaggggtaa
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