Phyllostomus hastatus (greater spear-nosed bat): 123817403
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Entry
123817403 CDS
T07912
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123817403 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phas03041
]
123817403 (EFTUD2)
Spliceosome [BR:
phas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123817403 (EFTUD2)
Complex C
U5 SnRNP specific factors
123817403 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
123817403
NCBI-ProteinID:
XP_045693040
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDAGEHDEDPPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWVSVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttgtatgatgagtttgggaattacattggcccggagctagattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgacgacgac
gatgatgacgacgcgggcgagcacgacgaggaccccccggggatggaggtggtgctgcac
gaggacaagaagtactaccccacggccgaggaggtgtacggccccgaggtggagaccatc
gtccaggaggaggacactcagcccctcacagaacctatcattaagccggtgaaaaccaag
aaattcactctgatggagcagacattacctgtcaccgtgtatgaaatggattttttggca
gatctgatggataactcggagctcatcagaaacgtgaccctctgcggccatctccatcac
ggcaagacgtgttttgtcgattgtttaatagagcagacccacccggaaatcagaaagcgc
tacgaccaggatctgtgctacactgacatcctcttcacagaacaggagagaggcgttggc
atcaaaagcactccggtgacagtggttttgccagacaccaaagggaaatcttacctcttc
aacataatggacaccccgggacatgtgaatttttctgacgaggtcacggctggcttgcgc
atctcggacggagtggtccttttcatcgatgctgcggagggcgtgatgctgaacacggag
cggctgatcaagcacgcggtgcaggaaaggctggcggtcaccgtgtgcatcaacaagatt
gaccgactgatcctggagctcaagctgcccccgactgatgcttactacaagctgcgtcac
attgtggatgaggtcaacggactgataagcatgtactccaccgacgagaacctgatcctg
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctacgccgacacgtttggtgacattaactaccaggagtttgct
aaaagactctggggtgacatctacttcaaccccaagacgcggaagtttaccaaaaaggcc
cccaccagcagctcccagaggagcttcgtggagtttatcttggagcccctttataagatc
ctcgctcaggttgtgggcgacgtggacaccagcctcccgaggaccctcgatgagcttggc
atccatctgaccaaggaggagctgaagctgaacatccgtcccctgctcagactggtctgc
aaaaagttcttcggcgagttcacaggcttcgtggacatgtgcgtgcagcacatcccttcc
cccaaggtgggcgccaagcccaagatcgagcacacctacacgggtggcgtggactccgac
ctcggcgaggccatgagcgactgcgaccctgacggccccctgatgtgccacacgaccaag
atgtacagcacagacgatggagttcagtttcacgccttcggccgggtgctgagcggcacc
atccatgccgggcagcctgtgaaggtgctgggggagaactacaccctggaggatgaggag
gactcccagatatgcaccgtgggccgcctctgggtctctgtggccaggtaccacatcgag
gtgaaccgagttcctgccggcaactgggtgctgatcgaaggtgtcgatcaaccgattgtg
aagacggcgaccataactgaaccccgaggcaacgaggaggctcagattttccggcccctg
aagttcaataccacgtctgtcatcaagatcgccgtggagccggtcaacccctccgagctg
cccaagatgctggacgggctgcgcaaagtcaacaagagctacccgtccctcaccaccaag
gtggaagagtctggcgagcacgtgattctggggaccggggagctgtacctggactgcgtg
atgcatgacctgcggaagatgtactcagagatcgacatcaaggttgctgatcccgttgtt
accttctgtgagacggtggtagaaacatcctccctcaagtgctttgcagaaacgcccaat
aagaaaaacaagatcaccatgattgccgagcccctggagaagggcctggctgaagacatc
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgactgggatctgctagctgcccgttccatctgggccttcggccctgacgccacg
gggcccaacatcctggtggacgacaccctgccctctgaggtggacaaggctcttcttggc
tcggtgaaggacagcatagtccagggcttccagtggggaaccagggaaggacccctctgt
gatgagttgattcgaaatgtcaagtttaagatcctagacgctgtggtcgcccaggagccg
ctgcaccggggcgggggccagatcatccccacggccaggagagtggtctactccgccttc
ctcatggccacccctcgcctgatggagccttactactttgtggaggtccaggcccctgca
gactgcgtctccgccgtgtataccgtcctggccaggcgcaggggacacgtgacccaggac
gcgcccatcccgggctcccctctctacaccatcaaagctttcatcccagccatcgactcc
tttggcttcgagactgacctgcggactcacacccaggggcaggccttttccttgtccgtc
ttccaccactggcagattgttcctggcgatcccctggacaagagcatcgtcattcgcccc
ttggagccacagccggcccctcacctggcccgagaattcatgatcaaaacccggcgccgg
aagggcctgagtgaggacgtgagcatcagcaagttcttcgacgaccccatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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