Phyllostomus hastatus (greater spear-nosed bat): 123819737
Help
Entry
123819737 CDS
T07912
Symbol
DDX58
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas04064
NF-kappa B signaling pathway
phas04622
RIG-I-like receptor signaling pathway
phas04623
Cytosolic DNA-sensing pathway
phas05160
Hepatitis C
phas05161
Hepatitis B
phas05162
Measles
phas05164
Influenza A
phas05168
Herpes simplex virus 1 infection
phas05169
Epstein-Barr virus infection
phas05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
123819737 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
123819737 (DDX58)
04623 Cytosolic DNA-sensing pathway
123819737 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
123819737 (DDX58)
05160 Hepatitis C
123819737 (DDX58)
05171 Coronavirus disease - COVID-19
123819737 (DDX58)
05164 Influenza A
123819737 (DDX58)
05162 Measles
123819737 (DDX58)
05168 Herpes simplex virus 1 infection
123819737 (DDX58)
05169 Epstein-Barr virus infection
123819737 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
phas04054
]
123819737 (DDX58)
Enzymes [BR:
phas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123819737 (DDX58)
Pattern recognition receptors [BR:
phas04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
123819737 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
AAA_24
MC7
PNMA
Motif
Other DBs
NCBI-GeneID:
123819737
NCBI-ProteinID:
XP_045696202
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MTAEERRNLHAFRDYVTKILDPTYILSYMAPWFKEDEMQYIQAEKSNKGVMEAASLFLKF
LLELQEEGWFRAFLDALHHAGYSGLYEAIESWDFQKIEKLEEYRLLLRRLQPEFKTRINP
NDILPEISKCLINQECEEIIQICSNKGPMAGAEKMVECLLRSDKENWPKSLTLALEKEES
NFRELWITEKGAQEKTKDLEDEEAETSEVQIFYKEEPEHQNLSQNSCPPSEVPLAHSPLK
PRHYQLELASPAIHGKNTIICAPTGCGKTFVALLICEHHLKKFPQGQKGKVVFFANQLPV
YEQQKSVFLNYFERLGYRVSGISGLTFENISVEQIIEDSDIIILTPQILVNSLKEGTIPS
LSVFTLMIFDECHNTNKRHPYNMIMFSYLDQKLGGSSDPLPQVIGLTASVGVGDAKNTRE
AMEYICKLCASLDTSVLATVKDNLEELEEVVYKPHKLFRKVESRSTNRFEYIISQLMKKT
ESLVKSVFDELGTISLESLSRIRNRRFGTQKYEQWIVDVQKKCTVLQLPDKERESRVCKA
LFLYTSHLRKFNDALIINEHARTKDALDYLKDFFRNVRASGFDEIEQDLTRRFEEKLQEL
ESISMDPSNENPKLRDLCYVLQEEYHLNPETRTILFVKTRALVDALKNWIEEHSTLSFLK
PGILTGRGKTNQNIGMTLPAQKCVLDAFRTHGDNKILIATSVADEGIDIAQCNLVILYEY
VGNVIRMIQTRGRGRARGSKCFLLTSNADVIEKEKMNMCKEKMMNTSILSLQTWDEAAFK
EKIRQIQITEKLIRDNQGKTEPVLDKENKKLLCRKCKAFACYTADIRVIEECHYTVVGDA
FRECFVTRSHPKPKNLGIFEKKAKIFCGRQDCSHDWGICVRYKTFDIPLIKIESFVVEDI
ATGAQRLYAKWRDFHFEKLPFDAAEMSK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaggagcggcggaacctgcacgccttccgggactatgtcacgaagatcctg
gaccctacttacatcctgagctacatggcgccctggtttaaggaggatgagatgcagtat
attcaggccgagaaaagcaacaagggcgtgatggaggctgcctcgctttttctcaagttc
ctcctggagctgcaggaggaaggctggttccgtgcctttctggatgctcttcaccacgca
ggttattctggactttatgaagctattgaaagttgggatttccaaaaaattgaaaagttg
gaggaatatagattgctattaaggcgtttgcaaccagaatttaaaaccagaattaaccca
aatgatattcttcctgaaatatctaaatgcttaatcaatcaggaatgtgaagaaattata
cagatttgttccaacaaggggccaatggcaggtgcagagaaaatggttgagtgccttctc
agatccgacaaggagaactggcccaaatctctgacacttgctttggagaaagaagagagc
aatttcagagaactgtggattacagagaaaggtgcgcaagagaaaacgaaagatcttgag
gatgaggaagcagaaacttccgaggtgcagattttctacaaggaagaaccggaacaccag
aatcttagtcagaattcatgcccaccttcagaagtgcctcttgctcacagccctctgaag
ccaagacattaccaactagagctggcttctcctgctatacacggaaaaaacacaataata
tgtgctcccaccggttgtggaaaaacctttgttgcacttcttatatgtgaacatcatctt
aaaaaatttccacaaggacaaaaggggaaggttgtgttttttgctaatcaactcccagtg
tatgaacagcaaaaatctgtgttcttaaactattttgaaagacttgggtacagagtttca
ggcatatctggattaacatttgagaatatctcagtggaacagattattgaggacagtgac
atcatcattttaactccacagattcttgtgaacagccttaaagaggggactatcccatca
ctctctgtcttcactttgatgatatttgatgaatgccacaataccaataagcgccatcct
tacaatatgatcatgttcagttatctagatcagaaacttggaggatcttcagacccactg
ccccaggtcattgggctgaccgcctcagttggcgttggggatgccaagaacacaagggaa
gccatggagtatatctgcaagctgtgtgcttctctggacacatcagtgctagcaacagtc
aaggacaacctggaggaactggaggaagttgtatataagccccataagttgttcaggaaa
gtagaatcacggagcaccaacagatttgaatatatcatctctcagctgatgaaaaagaca
gagagtctggtaaagagtgtctttgatgaactcggtaccataagcctcgaaagcttatct
cgaattcgaaataggcgttttggaacacagaaatacgaacagtggatcgttgacgttcag
aaaaagtgcaccgtgctgcagctgccggacaaagagagagagagcagggtctgcaaagcg
ctgtttctctacacttcccatttgcggaaatttaatgatgctctcattatcaatgagcat
gcacggacaaaagatgctctggattacttgaaagacttcttccgtaatgtccgagcgtca
ggatttgatgagattgagcaggatctcactcggagatttgaagaaaagctgcaggaacta
gagagcatttccatggatcccagcaacgagaaccctaaactcagggacctctgctacgtc
ttgcaggaggagtaccacctgaacccagagaccagaaccattctctttgtgaaaaccaga
gcgcttgtggacgctttaaagaattggattgaggaacattctacactcagctttctaaaa
cctggcatattgactggacgtggcaaaacaaatcagaacataggaatgaccctcccagca
cagaagtgtgtactggatgcattcagaacccacggagacaacaagatcctgatcgccacc
tcggtggctgatgaaggcattgacattgcgcagtgcaatctggtcatcctgtacgagtat
gtgggcaacgtcatccgaatgatccagaccagaggcagaggaagagcaagaggtagcaag
tgcttccttctgactagtaatgctgatgtaattgaaaaagaaaaaatgaacatgtgcaaa
gaaaaaatgatgaatacctccattttaagccttcagacatgggatgaagcagcatttaaa
gaaaagattcgccagatacagattactgaaaaattaatcagggataatcaaggaaaaaca
gaacctgtacttgataaggaaaataaaaagctgctctgcagaaagtgcaaagcctttgca
tgttatacggctgatataagagtgatagaggaatgccattacactgtggttggagatgct
ttcagggagtgctttgtgactagatcacatcccaaaccaaagaatttggggatttttgag
aagaaagcaaagatattctgcggtagacaggactgcagccacgactgggggatctgtgtg
aggtacaagacatttgacatcccacttataaaaattgaaagttttgtggtggaggatatt
gccactggagctcagagactgtatgcaaagtggagggactttcattttgagaagctacca
tttgatgctgcagaaatgtccaaatga
DBGET
integrated database retrieval system
