Proteus hauseri: PH4a_01315
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Entry
PH4a_01315 CDS
T05854
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
phau
Proteus hauseri
Pathway
phau03030
DNA replication
phau03410
Base excision repair
phau03420
Nucleotide excision repair
phau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PH4a_01315 (ligA)
03410 Base excision repair
PH4a_01315 (ligA)
03420 Nucleotide excision repair
PH4a_01315 (ligA)
03430 Mismatch repair
PH4a_01315 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phau03032
]
PH4a_01315 (ligA)
03400 DNA repair and recombination proteins [BR:
phau03400
]
PH4a_01315 (ligA)
Enzymes [BR:
phau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PH4a_01315 (ligA)
DNA replication proteins [BR:
phau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PH4a_01315 (ligA)
DNA repair and recombination proteins [BR:
phau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PH4a_01315 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PH4a_01315 (ligA)
MMR (mismatch excision repair)
DNA ligase
PH4a_01315 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PH4a_01315 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-ProteinID:
QAV22056
UniProt:
A0A410X633
LinkDB
All DBs
Position
complement(249709..251730)
Genome browser
AA seq
673 aa
AA seq
DB search
MNKNIQQRIDELRATLRHHEYLYHVMDAPEIPDAEYDRLMNELKALETEHPSFITPDSPT
QRVGALPLTAFEQVRHEIPMLSLDNAFDEATYEAFDKRVRDRLKNNEEITFCCELKLDGL
AVSLLYENGVLVQAATRGDGTTGENITENVRTIKAIPLRLYGDDIPARIEIRGEVFMTEK
GFEHLNEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPASH
YERLQQFKKWGLPVSDAVKLCTGSKAVLAFYQHIEEIRPNLGFDIDGVVIKVDDIALQEE
LGFVSRAPRWAIAYKFQAQEQITVIKDVEFQVGRTGAITPVARLEPVQVAGVVVSNATLH
NADEIERLGLRIGDTVVIRRAGDVIPQVVSVIEEKRPENAQEIVFPIQCPICQSDVERIE
GEAVARCTGGLICGAQRKEALKHFVSRRAMDVDGMGDKIIDQLVEKEYVKTPADLFRLDA
KILAGLERMGEKSAVKLINALEKAKSTTFARFIYALGIREVGEATANGLTTHFATLDALR
HADIDALKAVPDVGDIVAKHVVNFFQEEHNKTVIDQLIHDAGITWAAPVIVTHKAGDNAF
AGKTVVLTGSLSQLTRDEAKDRLVALGAKVSGSVSKKTDMVIAGEAAGSKLVKANELGVT
VIDEDEMIRLLDL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatatccaacaacgtattgatgaacttcgcgctaccttacgtcaccatgaa
tatctctaccatgtcatggatgcacccgaaattcctgatgctgaatatgatcgcttaatg
aatgagctaaaagcattagaaactgaacacccgtcctttatcacacctgattctccgact
caacgagttggtgctctgcctttaacggcatttgagcaagttagacatgaaatacctatg
ctttctctagataatgctttcgatgaagcgacttatgaggcatttgataaacgagtacgt
gaccgcttaaaaaataatgaagaaatcaccttttgctgtgaattaaaactcgatggttta
gcggtcagcttactgtatgaaaatggtgtgttagtacaagctgcaactcgaggcgatggc
actacaggggaaaatatcactgaaaatgtgagaaccattaaagctatccctctgcgttta
tatggtgatgatatccccgctcgtattgaaattcgtggagaagtctttatgacggaaaaa
ggctttgaacatttaaacgaagaagcaagacgtaccggcggtaaagtatttgctaaccca
cgtaatgcggcagctggatcattacgccaattagatcctcgaattacggctaaacgtcca
ctcactttcttttgctatggcgtgggcgtgcttgaaggtggtgaattacctgcaagccat
tatgagcgcttgcagcagtttaaaaaatggggattacccgttagtgatgcagtaaaactc
tgcactggcagtaaagctgttttagctttttatcagcacattgaagaaattcgtcctaat
ttaggttttgatatcgatggcgtagttatcaaagtcgatgatattgcactacaagaagaa
ttaggttttgtatcaagagcaccacgctgggcaattgcttataaattccaagcgcaagaa
caaataaccgtcatcaaagatgtcgagttccaagtcggtcgtacaggggcaataacacct
gttgcacgcctagaacctgtacaggttgcgggtgtggtggtgagtaatgcgacactccat
aatgcagatgaaattgaacgcttagggcttcgtattggtgatacggttgttattcgtcgt
gcaggcgatgttattccacaagttgttagtgtgattgaagaaaaacgccctgaaaatgct
caggaaatcgtttttcctatccagtgtcctatttgtcaatcagacgttgaacgtattgaa
ggagaagcggttgcgcgttgtacggggggcttaatttgtggtgctcaacgtaaagaagcg
ttaaaacactttgtttcacgccgtgcaatggatgttgatggcatgggtgataaaattatc
gaccagcttgttgaaaaagaatacgtaaaaacgccggctgatcttttccgtttagatgcg
aaaatattagcgggtctagaacgaatgggtgaaaaatcagcagtaaaattaattaatgct
ttagaaaaagccaaatctacgacttttgcacgttttatttacgcgcttggaatacgagaa
gtaggggaagcaacagcaaatggtttaacaacacattttgcgacactcgacgcacttcgt
catgcagatattgatgctttaaaagcagtacctgatgtcggcgatattgtggctaaacat
gttgtgaattttttccaagaagagcacaacaaaacagttattgatcaactaattcatgat
gcaggaataacttgggcagccccagttatcgtgactcataaagcaggtgataatgctttt
gcaggtaaaactgtagtattgacaggatcactttcacaactaacacgtgatgaagcaaaa
gataggcttgttgcactaggtgcaaaggtgagtggtagtgtttctaaaaagacagatatg
gtgattgcaggagaagctgcaggctctaagttggtgaaagctaatgagttaggtgttacc
gtcattgatgaagatgaaatgataagattacttgatctctag
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