Phenylobacterium parvum: HYN04_04080
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Entry
HYN04_04080 CDS
T05485
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00300
Lysine biosynthesis
phb00550
Peptidoglycan biosynthesis
phb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYN04_04080
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYN04_04080
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phb01011
]
HYN04_04080
Enzymes [BR:
phb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HYN04_04080
Peptidoglycan biosynthesis and degradation proteins [BR:
phb01011
]
Precursor biosynthesis
Amino acid ligase
HYN04_04080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AWM77004
UniProt:
A0A2Z3I0R8
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All DBs
Position
851036..852484
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AA seq
482 aa
AA seq
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MRLSRILQRDLPVDPEITAVTSDSRKAGPGVLFAALPGVARDGADFAPQAVAAGAAAVLC
GRDLPGLGVPVVVSGDPRRAYALAAATLQGRQPEVVTAVTGTNGKTSVAGFRRQIASASG
RVSASMGTLGVRISEAGREDVVVTPPGLTTPDAGDVAVLLAELADRGVTDLALEASSHGV
DQRRLDGVRLSAAAFLNLTQDHLDYHGDMASYQAAKLRLFDTLLPRGAPAVLNADSPAFP
AFAAAATLAGADLITFGEAGRDLRLTKREPRPGGQVLTLACAGREWRVDLPLAGAFQAMN
ALAAAGLSLAVGDAPEAVFAALEGLSGAPGRLQRVGAAPGGGEAYVDYAHTPDGLETVLA
ALRPHASGRLVVVFGAGGDRDRTKRPLMGEIAGRLADRAIVTDDNPRSEDSAAIRAEVRA
GHPGLEEIGDRRAAIRAAVADLREGDVLVVAGKGHEQGQTIAGVVHPFDDVAETLAALEV
RA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtcccgcatcctccagagggacctaccggtcgatccggagatcaccgccgtg
acttccgacagccgcaaggccgggccgggcgtgctcttcgccgccctgccgggggtggcg
cgggacggcgccgacttcgcgccccaggcggtggccgccggcgccgccgccgtgctctgc
ggccgggacctgcctggcctgggggttcccgtcgtcgtctccggggatccgcgccgggcc
tacgccctggccgccgccaccctccaggggcgtcagcccgaggtggtgaccgcggtcacc
gggacgaacggcaagacctccgtcgccggcttccgccgccagatcgcctccgcctcgggg
cgggtgtcggccagcatgggcaccctgggcgtccgcatttccgaggctggccgggaggat
gtcgtcgtgacgccccccgggctcaccacgccggacgcgggggacgtggccgtcctgctc
gccgagctggcggaccgcggggtgaccgacctggccctcgaagcctcgtcgcacggcgtc
gaccagcgccgcctcgatggcgtccgtctgtcggcggccgccttcctgaacctgacccag
gatcacctcgactatcacggcgacatggccagctaccaggcggccaagcttcgcctgttc
gacaccctccttcctcggggcgcgccggcggtcctgaacgccgactccccggcctttccg
gccttcgccgccgcggcgaccctggccggcgccgacctgatcacctttggagaggctggc
cgcgacctgcgcctgacaaagcgcgagccccggccgggcggacaggtcctgaccctggcc
tgcgcgggccgggaatggcgggtggacctgcccctggccggcgccttccaggccatgaac
gccctggcggcggcgggcctcagcctggccgtcggggatgcgcccgaggcggtcttcgct
gcgctcgaggggctttccggtgcgcccgggcggctccagagggtgggcgcagccccgggc
ggcggcgaggcctatgtggattacgcccacaccccggacgggctggagacggtgctggcg
gcccttcggccccacgcctccggccggctggtggtggtgttcggcgctggcggcgaccgg
gaccgcaccaagcgccccctgatgggcgagatcgcgggccggctggccgaccgggccatc
gtcaccgacgacaatccccgcagcgaggactccgccgcgatccgcgccgaggtccgggcc
ggtcatccgggccttgaggagatcggcgaccgtcgcgcggcgatccgcgccgccgtggcc
gacctgcgcgaaggcgatgtcctggtggtggccggcaagggccacgagcagggccagacc
atcgctggcgtggtccatccctttgacgacgtcgccgagaccctggcggccctggaggtg
cgcgcatga
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