Phenylobacterium parvum: HYN04_04155 Help Entry HYN04_04155       CDS       T05485                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism phb  Phenylobacterium parvum Pathway phb03030   DNA replication phb03410   Base excision repair phb03420   Nucleotide excision repair phb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:phb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HYN04_04155    03410 Base excision repair     HYN04_04155    03420 Nucleotide excision repair     HYN04_04155    03430 Mismatch repair     HYN04_04155  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:phb03032]     HYN04_04155    03400 DNA repair and recombination proteins [BR:phb03400]     HYN04_04155 Enzymes [BR:phb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HYN04_04155 DNA replication proteins [BR:phb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HYN04_04155 DNA repair and recombination proteins [BR:phb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HYN04_04155    NER (nucleotide excision repair)     GGR (global genome repair) factors      HYN04_04155    MMR (mismatch excision repair)     DNA ligase      HYN04_04155   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HYN04_04155 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase BRCT HHH_2 PTCB-BRCT Nlig-Ia Motif Other DBs NCBI-ProteinID:  AWM77017 UniProt:  A0A2Z3HMT9 LinkDB All DBs Position 869956..872070 Genome browser AA seq 704 aa AA seqDB search MPEIPVSDLTEAQAAEELTRLADEIAAHDLAYHQADAPVISDAEYDALRRRNAAIEARFP HLVRENSPSLSVGAARSDQFSPVEHGAPMLSLDNAFSDDDALEFDSRVRRFLRLDAADIA YTAEPKIDGLSASLRYEGGVLVRGATRGDGRVGEDVTANLLTIGDIPRRLSGSGWPEVIE VRGEVYLSHAAFAGLNAQAEAAGQKTYANPRNAAAGSLRQIDPRITASRPLAFFAYAWGE TSAPFADTQWRALSLLAEWGFVTTPQSRRVEGAEGLLAAYREMEAARPHLGFDIDGVVYK VDRLDWQQRLGFITRTPRWAIARKFPAEQARTVLTAIDLQVGRTGAVTPVARLVPVTVGG VVVENATLHNGDEIARKDIRVGDTVIVQRAGDVIPQIVGVVEAERPDPPPAPFAFPEVCP CALATPLVRETTASGAETVVRRCSGEFACPFQRIEHLRHFVSRRAYDIEGLGEKQLAAFF DRGWVREPADIFRLARDAGRLEELRGLDGYGETSVANLAAGIEARRDIPLDRFIFGLGIR HIGETTAMVLARGYGSADAFLAAMDRVAARDPEAVEELDALDQVGGAVIEAAASYFGEAH NRRIVAELVAELTIRDAERPRQDTAVAGKTVVFTGALERMTRDEAKARAESLGAKVAGSV SKKTDIVVAGPGAGSKLKTAESLGLQVLTEAEWLELIGDASPGG NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atgcctgagatccctgtctccgacctgaccgaagcgcaggccgccgaggaactgacccgg ctggccgacgagatcgccgcccatgacctggcctatcaccaggctgacgccccggtcatt tccgacgccgaatacgacgccctgcggcgacgcaacgccgccatcgaggcgcgcttcccg cacctggtgcgcgagaactccccctccctgagtgtgggcgccgcccggtccgaccagttc tcgcctgtcgagcatggcgcgcccatgctgtcgctggacaacgccttctccgacgacgac gccctggagttcgactcccgggttcgccgcttcctgcgactcgacgccgccgacatcgcc tacacggccgagcccaagatcgatggcctttcggcctccctgcgctacgagggcggggtg ctggtgcgcggcgcgacccgcggggacggccgggtgggcgaggacgttacggccaaccta ctgacgatcggcgacattccccgccgtctgtccggctccgggtggcccgaggtgatcgag gtgcggggggaggtctatctctcccacgccgccttcgccgggctgaacgcccaggccgag gccgccgggcagaagacctacgccaatccgcgcaacgccgccgccggctccctgcggcag atcgatccgcgcatcaccgccagccggcccttggccttcttcgcctatgcctggggcgag accagcgcccctttcgccgacacccagtggcgggccctgtccctcctggcggagtggggc ttcgtcaccaccccccagtcgcgccgggtcgagggcgccgagggcctcctggccgcctat cgcgagatggaggccgcccggccgcacctgggcttcgacatcgacggggtggtctacaag gtggaccggctggactggcagcagaggctgggcttcatcacccggaccccgcgctgggcc atcgcccgcaagttccccgccgagcaggcccggacggtcctgacggccatcgacctgcag gtggggcgtaccggcgccgtcaccccggtcgcccggcttgtccccgtcacggtcggcggt gtggtggtcgagaacgccaccctgcacaatggcgacgagatcgcccgcaaggacatccgg gtcggcgacacggtcatcgtccagcgcgccggagacgtcattccccagatcgtcggggtg gtggaggccgagcgccccgacccgccgccggcgcccttcgcctttcccgaggtctgcccc tgcgccctcgccacccccctggtgcgcgagaccaccgcctcgggcgccgagaccgtggtg cgccgctgctcaggcgagttcgcctgccccttccagcgcatcgagcacctgcgccacttc gtctcccgccgggcgtacgacatcgagggtttgggcgagaagcagctggcggccttcttt gatcgcggctgggtgcgcgagcccgccgacatcttccgcctggcccgcgacgccgggcgg ctggaggaactgcgcggcctggacggttatggcgagaccagcgtcgccaacctcgccgcc gggatcgaggcgcggcgcgacattcccctcgaccgcttcatcttcggcctgggcatccgc cacatcggcgagaccactgcgatggtcctggcgcgcggctacggctcggccgacgccttc ctggccgccatggaccgggtcgcagcccgggatcccgaggccgtcgaggagctcgacgcc ctggaccaggtgggcggcgccgtcatcgaggccgccgcaagctatttcggcgaggcccac aaccggcggatcgtggccgagctggtcgccgagctgaccatccgcgacgctgagcgtccg cgccaggacaccgccgtggcgggcaagaccgtggtcttcacaggcgccctggagcggatg acccgggacgaggccaaggcccgcgccgagtccctgggcgccaaggtggcgggctcggtc tcgaagaagacggatatcgtagtggccggcccgggcgccggctccaagctcaagaccgcc gagtccctgggtctccaggtcttgacggaagccgagtggcttgaactcatcggcgacgcc agtccaggaggatga

DBGET integrated database retrieval system