Pedobacter heparinus: Phep_0784
Help
Entry
Phep_0784 CDS
T00978
Name
(GenBank) Lyase catalytic
KO
K08961
chondroitin-sulfate-ABC endolyase/exolyase [EC:
4.2.2.20
4.2.2.21
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Phep_0784
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.20 chondroitin-sulfate-ABC endolyase
Phep_0784
4.2.2.21 chondroitin-sulfate-ABC exolyase
Phep_0784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lyase_catalyt
Lyase_N
Lyase_8
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
ACU03006
UniProt:
C6Y213
LinkDB
All DBs
Position
923574..926666
Genome browser
AA seq
1030 aa
AA seq
DB search
MNTIFRERPDMNRLLFVFLLICSITVNGYAQMQTDICENILPKNWQVVNGKLSLSDQHFK
LGKQAVKWSWTAGQKSRLHISDKAFEAVAGNPRSTFVVWIYNETPINDKLLFQFGNGVKT
ASGFEFKLNFKGWRTAWVMYHRDMQGKPVEGMNAMQVIAPASVKNGTVFLDQLMYDVTIN
PRSPMRDEQLPFINPDADKAANAHWNALYNFSHSPHYLTLAEGVTRQELLDLELISSRYI
DMIMPVKGTLVKNMLEEIEKGFAYWNIRREGSRISGRPVYSMNDTELVSLSPAENVKEAN
RLSGIKRYTQLMLQVAQAFHAGTDAKEKLRLENIFMDMLDHLEDQGWAYGSGMGALHHHG
YNLEGYYPSCLLMKDVIKRQGKLERTFQSMSWFSGLGRTLQRPLPSSNIDVFNTLLGSML
SSILIMDNSPEKLRYLHSFSNWLSENVKPDHTIEGAFKPDGAVFHHGNLYPAYGIGGYTG
ISPVVFALSGTSFRMDQEAHESLRNSLLMMHYYTHPFKWPVSVAGRHPTGSWRIADLPYA
YMAMAGTPDGKNKTDSLMAAIYLKLNEGKKNRWIAAFKAAKIKPAGYSSGHWNLNYGLFD
IHRRKDWLLTIRGHNRYLISNESYPGANVFGRYVAYGQLEVLFPETKTDDGSNFRDEGWD
WNNIPGTTTLHVPIAKLRANIINADDFSGIEEMLITDERFAGGTTFKKQGMFAMKLHGHD
KYDMGSFRATKSWFMFDSLVVCLGSDIRNTIPDYPTQTTLFQNYLKKNSDTVVVNERVVT
AFPYKEEGQKGKALSVIDNRGIGYYLPDATTVLLTKAKQLSRDQKDTRETTGNFAKLILE
HGNAPVNAGYEYAMLVKTDKQEMEKMVSLMQSKQPLYKVLRKDSIAHTVWYAPEQLTAMA
VFNSNKQLNDSLLIGNNRPCLLMYHKEGSSLSLSVTDPDLAFYEGPDDSPISPSGKREEV
SIYSRSWYRSPSKPSVVKLLIKGRWTADPANKALKAIPQAGGNTLVSINCKDGLVSSVQL
IKSNNKENVK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaattttcagagaaagaccagatatgaaccgcctgttgtttgtttttttattg
atttgcagcatcactgtaaatggttatgcgcaaatgcagaccgatatttgcgaaaatata
ctgcccaaaaactggcaggttgtgaatgggaaattatcgcttagcgaccagcattttaag
ctgggcaaacaagctgtaaaatggtcctggacagcaggacaaaaaagccggttgcacatt
agtgataaagcttttgaagcggttgccggcaacccgagaagtacttttgtagtttggata
tacaatgaaacaccaataaatgacaagttgttgtttcagtttggcaatggagttaaaacc
gcctctggttttgaatttaagctgaactttaaaggttggcgtacggcatgggtaatgtat
cacagggatatgcagggtaagcctgttgaaggaatgaatgccatgcaggtcatagcgcct
gcttccgtaaaaaacgggaccgtttttttagatcagctgatgtatgatgtaaccatcaac
ccccgctcccccatgcgtgatgaacaattgccgtttattaatcccgatgccgataaagcg
gccaatgcgcattggaacgcactgtataattttagccatagtcctcattatttaacactt
gcagaaggagtaaccaggcaggaactgctcgacctggagctgatcagcagtcggtacata
gacatgatcatgcctgtaaaaggtactttggtaaaaaacatgcttgaagagatagaaaaa
ggttttgcctactggaacattcgccgcgaaggcagcagaataagtggcaggccggtctat
tccatgaacgatacggaactggtatctttatcacctgcagaaaatgtaaaggaagccaac
cgcttatctggcatcaagcggtatacacaattgatgttgcaggtagcacaggcttttcat
gccggtactgatgcgaaagaaaagctgcggctggaaaatatttttatggatatgctggac
catcttgaagatcagggatgggcctatggcagtgggatgggggctttacatcaccatggt
tacaatctggaaggctattatccgtcgtgtttgctaatgaaagacgtaattaaaagacaa
ggtaaactggaacgtacttttcagagcatgagttggtttagtggtttgggccgtacttta
caacggccattgccatcgtccaatatagatgtatttaatacactgctgggcagtatgctt
tccagcattttaattatggacaactcgcccgaaaaactgcgttatctgcatagtttttcc
aattggttgtcggaaaatgttaagccagatcataccatagaaggggcctttaaacctgat
ggggctgtgtttcatcatggaaacctgtacccagcctacggaattggtggttatacaggc
atttcgccagtcgtttttgcactaagcggtacaagcttccggatggaccaagaggcccat
gaaagtttaaggaatagtttgctgatgatgcattattatacccatccatttaaatggccg
gttagtgtggcagggcggcatcctacgggcagctggcgcattgccgatctgccttatgcc
tatatggccatggcaggtacacccgacggaaaaaacaaaaccgatagcctgatggcggca
atttatttaaagctgaatgaaggcaaaaaaaacaggtggattgctgcttttaaagcagct
aagattaaaccggctggctacagcagcgggcactggaacctgaattatggccttttcgac
attcacaggaggaaggactggttgctgaccatcagggggcataaccgctatctgatcagc
aatgaatcctaccctggggcaaatgtatttggaaggtatgtagcctatggacagctggag
gtgctctttccggaaaccaaaacggatgatggcagcaattttcgggatgaaggctgggac
tggaacaacatccccggtactactaccctgcatgtgcccatcgcaaagctgagggcaaac
atcatcaatgcggatgattttagtggcattgaagaaatgctgatcactgatgagcgcttt
gccggaggaaccacatttaaaaaacaaggtatgtttgccatgaaactgcatggacatgat
aaatatgatatgggaagtttcagggctacaaaatcctggtttatgtttgatagcctggtg
gtatgcctgggctcggatattcgcaatactatccctgattatcctacacaaactaccctt
tttcaaaactatttgaaaaaaaacagtgatacggtcgtggttaatgagcgggtagtaact
gcatttccctataaagaagaaggacaaaaagggaaagccttaagtgtgatagataaccgg
ggtattggttattatcttccagatgctacaacggttttacttacaaaagcaaaacaattg
tcgagagaccagaaagatacacgtgaaactactggtaattttgctaaattaatacttgaa
catggaaatgcacctgtaaatgcaggctacgaatacgccatgctggttaaaacagataag
caggaaatggaaaaaatggtctcgttgatgcaaagcaaacaacctttgtataaagtgctg
cggaaagacagtattgcccataccgtatggtatgcgccggaacaacttaccgcaatggct
gtttttaacagcaacaaacagttgaatgattccctgctgatcggcaacaacaggccctgt
ctgctcatgtaccataaggagggcagtagtttgtctttgtcggtcaccgatcctgacctt
gctttttatgaagggccagatgatagtccgattagtccatccggcaaaagagaagaagta
agtatttattcgcgcagctggtacagatcaccctcaaagccttcggtagtaaagctgctg
atcaagggcagatggactgcagatccagctaacaaagcattaaaagcaatacctcaggct
ggcggaaacacccttgtcagtataaattgtaaagatggcctggtgtcatctgtccaacta
attaaaagtaataataaggagaatgtaaaatga
DBGET
integrated database retrieval system
